| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1975 |
|---|
| Symbol | |
|---|
| ID | 7173894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 2442415 |
|---|
| End bp | 2443182 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643540492 |
|---|
| Product | CRISPR-associated protein Cas4 |
|---|
| Protein accession | YP_002436386 |
|---|
| Protein GI | 218887065 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1468] RecB family exonuclease |
|---|
| TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 87 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCCGG AGTCCGACCT GATGCCGGTC TCGGCGTTGC AGCATCTGAT ATATTGCCCA
CGCCAGTGCG CGCTCATCCA CATCGAACAG GTGTGGGACG ACAATGTGCA CACCGCGCTG
GGGAATATCC TGCACGAGCG GGTGGACAGG CCGGGCATGG AGCGGCGCAG GGGCGTGCGC
ACGGAATTCG GCGTGCCCCT GCGCTCGCTG GCGCTTGGCC TTGCGGGCCG GGCCGATGCG
GTGGAGTTTG CCGCCGACGG TCCCTGCCCA GTGGAGTACA AGCAGGGGCG GCCCAAGCGC
CACGCCGCCG ACCACATCCA GCTTTGCGCG CAGGCCATGT GCCTTGAGGA AATGACCGGA
CGCGCCGTGC CGCTGGGCGT GCTGTTTTAC GCCACCACGC GAAAACGCCA GACGGTGGAA
CTGGACGAAC ACCTGCGGCA GCTGGTGCGC GAGACGACCA TGGCCCTGCA TGCGCTTGTC
GCCACGGGCA TCACCCCGCG TCCGGAACCC GGCCCGAAAT GCAAGGGATG TTCGCTTGCG
GACCGTTGCC GCCCCGGCAC GTTCGCCCAG GGTGGGCGCA GCGCCGCCCG CTATCTGGCG
CAGGCCCGGC GGGCAGTGCG CGACGAGGAT GCCCGCCCCG GAGCGCGGGA TGGCGTCCCC
GATGGCATCC TTGACGGCGT CCCGAAGGGG ACGCGGGATG GCGCGCGGGA CATCGACATG
CCCTCCGCCC CGCGCCCGCC CCATCCGCCC CGTCAGGAGG ACGATTGA
|
|---|
| Protein sequence | MYPESDLMPV SALQHLIYCP RQCALIHIEQ VWDDNVHTAL GNILHERVDR PGMERRRGVR
TEFGVPLRSL ALGLAGRADA VEFAADGPCP VEYKQGRPKR HAADHIQLCA QAMCLEEMTG
RAVPLGVLFY ATTRKRQTVE LDEHLRQLVR ETTMALHALV ATGITPRPEP GPKCKGCSLA
DRCRPGTFAQ GGRSAARYLA QARRAVRDED ARPGARDGVP DGILDGVPKG TRDGARDIDM
PSAPRPPHPP RQEDD
|
|---|
| |