Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1957 |
Symbol | |
ID | 7173875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2418778 |
End bp | 2419854 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643540473 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002436368 |
Protein GI | 218887047 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 104 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACGA AGCTGCACGC GGCCCGCGCC GCGCTGGTGA TGGTGGGCCT TGCCCTGGCG GTGCTGGCGG CGACGCTGTT CGCGGGCCCC GCCGTGGCGG CGGAGGAAAA GGTGCTGCAC GTCTACAACT GGTCGGAATA CGTGCCCCAG TCGGTGCTCG ACCGGTTCAC CAAGGAGACG GGCATCAAGG TGGTGTACAC CACCTACGAA TCCAACGAGG CCATGTACGC CAAGGTCAAG CTGCTGAAGG GCGTGGGTTA CGACGTGGTC GTGCCGTCCA CCTACTTCAT CTCCATGATG CGCGACGACG GGCTGCTGGC CAGGATCGAC AAGTCCAAGC TGAAGAACTT CAAGAACCTT TCGCCCAAGG TGCTGAACCA GCCGTTCGAT CCGGGCAACG AATACTCCGT GCCTTACATG TGGGGTTCGG CGGGGCTGAT GGTGAACAGG AAGGTGGTGG ACCCGGCCTC CATCACCAGC TGGAACGACC TGAACCGCCC CGAATTCGCG GGCAAGGTCA TCCTGTCCGA CGACCAGCGC GACTCCATGG GCGTGGCCCT GAAGGCGCTG GGCTACTCGG TGAACTCCAC CAATGAAGCG GAAATCAAGG CCGCCTACGA ATGGCTGAAG AAGCTGCTGC CCGCCGTGCG CGTGTTCGAC GTGACCGCCA GCAAGCAGGC CTTCATCAGC GAGGAAGTGG CCGCGGGCCT GATCTGGAAC GGCGATGCCT ACATCGCCGC CAGCGAGAAC GAGAACCTGG TGTACGTCTA CCCCAGGGAA GGCGTGCCCC TGTGGGTGGA CAGCCTGGCC ATTCCCGTGG GGGCCAAGCA CAAGGACAAC GCCCACAAGT TCATCGACTT CCTGCTGCGG CCCGACGTGG CCAAGGAATG CGTGGAGGAA TACAACTACT CCACCCCCAA CGTGGGCGCG CAGAAGATCC TTTCGCCCGA GTTGGCCAAG AGCCGCATCA CGTCGCCGAG TGACGCGGAC CTGAAGAACG CCGAGTTCAC CAACAGCGTA GGCAATGCGC TGGAGATCTA CGAAAAGTAT TGGGAGATGC TGAAGACGGG CAGCTAG
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Protein sequence | MRTKLHAARA ALVMVGLALA VLAATLFAGP AVAAEEKVLH VYNWSEYVPQ SVLDRFTKET GIKVVYTTYE SNEAMYAKVK LLKGVGYDVV VPSTYFISMM RDDGLLARID KSKLKNFKNL SPKVLNQPFD PGNEYSVPYM WGSAGLMVNR KVVDPASITS WNDLNRPEFA GKVILSDDQR DSMGVALKAL GYSVNSTNEA EIKAAYEWLK KLLPAVRVFD VTASKQAFIS EEVAAGLIWN GDAYIAASEN ENLVYVYPRE GVPLWVDSLA IPVGAKHKDN AHKFIDFLLR PDVAKECVEE YNYSTPNVGA QKILSPELAK SRITSPSDAD LKNAEFTNSV GNALEIYEKY WEMLKTGS
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