Gene DvMF_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1826 
Symbol 
ID7173742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp2228497 
End bp2229498 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content65% 
IMG OID643540341 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002436238 
Protein GI218886917 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGC TGCTCGACGT ATCCAACCTT ACCGTCAAGT TCGCGCTGCG CGACACCGCG 
CTTACCGCCG TCAACGACGT CTCGTTCACC CTGGCCAAGG GCGAGCGCCT GGGCCTTGTG 
GGCGAATCGG GCGCGGGCAA GTCCGTCACC GGGTTCTCCA TCCTGAACCT GGTGTCCAAG 
CCCGGCTTCA TCGCGGGTGG TTCCGTGCTG TTCGAGGGCA AGGACCTGAC CAGGGCCGAC 
GCGGAAACCC TGCGCGACAT ACGCGGCAAC CGCATCAGCA TGATCTTTCA GGACCCCATG 
ATGACCCTGA ACCCGGTGCT GACCGTGGGC ACGCAGATGA TCGAAACCAT CCTTGCCCAC 
AAGAAGGTGA CCCGCAAGGA AGCCGAGGCC ATTGCCCTGG ACAAGCTGCG CAAGGTCTAC 
ATTCCCTCGC CGGAACGCCG CCTGGCCCAG TACCCGCACG AGTTTTCCGG CGGCATGCGC 
CAGCGCATCG TCATCGCCAT CGCGCTTCTG ACCTCGCCGT CGCTGATCAT CGCCGACGAA 
CCCACCACCG CGCTGGATGT GACCATCCAG GCCGAGATCA TGGACCTGCT GCTGGAGCTG 
TGCCAGTCGG AGGACATGGG CCTCATCCTG ATCACCCACG ACCTTGGCGT GGTTTCGCAG 
GTTACCCAGA AGATCGCGGT GATGTACGCG GGCGGCATCG TGGAAATGGG CGACACCGCC 
ATGGTGGTGG GCGAGCCGCT GCACCCCTAC ACGCGGGGCC TCTTGGGCGC GCTGCCGCAG 
TGTGCGGACA AGGCCGACTG CGGTCTTGAG GATGTGGCCG CACCCCGCGT GCGCCGCCGC 
CTGAACCAGA TCCCCGGCAG CATGCCCAGC CTTTCCGACG TGCCGCGCGG CTGTCCGTTC 
AACAACCGCT GCGAACTGTG CGAAACCGTG TGCACCACCA CCCGGCCACT GCTCGAAGTG 
AAGAGTGATG GGCGCATGGC TGCCTGTCAT ATGGTCGCTT AA
 
Protein sequence
MQPLLDVSNL TVKFALRDTA LTAVNDVSFT LAKGERLGLV GESGAGKSVT GFSILNLVSK 
PGFIAGGSVL FEGKDLTRAD AETLRDIRGN RISMIFQDPM MTLNPVLTVG TQMIETILAH 
KKVTRKEAEA IALDKLRKVY IPSPERRLAQ YPHEFSGGMR QRIVIAIALL TSPSLIIADE 
PTTALDVTIQ AEIMDLLLEL CQSEDMGLIL ITHDLGVVSQ VTQKIAVMYA GGIVEMGDTA 
MVVGEPLHPY TRGLLGALPQ CADKADCGLE DVAAPRVRRR LNQIPGSMPS LSDVPRGCPF 
NNRCELCETV CTTTRPLLEV KSDGRMAACH MVA