Gene DvMF_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1794 
Symbol 
ID7173710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp2194483 
End bp2195559 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content68% 
IMG OID643540309 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002436206 
Protein GI218886885 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value0.741097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGA AGATCTGCCT GATGCCGGGC GACGGCATCG GCCCGGAAAT AGTGGAACAG 
GCCGTGAAGG TACTGGACAA GGTGGCCAAG AAGTTCGGCC ACACCGTCAG CTACACCAAT 
GCGCTCATCG GCGGCGCGGC CATCGACGCC ACGGGCGGCC CCCTGCCGGA CGAAACCGTG 
GCCGCGTGCA AGGCGGCGGA CGCCGTGCTG CTGGGCGCCG TGGGCGGCCC CAAGTGGGAT 
ACCCTGCCCA CCGCCATCCG CCCGGAAAAG GGGCTGCTGG GCATCCGCAA GGCGCTGGGG 
CTGTTCGCCA ACCTGCGCCC GGCCACCCTG CTGCCCGAAC TGGCCGGGGC CTGCCTGCTG 
CGCGCCGACA TCGCCGCGCA GGGTCTGGAC GTGATGGTGG TGCGCGAGCT GACCGGCGGC 
GTCTACTTCG GCGAGCCGGT GTGCGAGGAA GAGCTGCGCG ACGGCCTGCG CACCAGCTAC 
AACACCATGA TCTACAATGA AGAAGAGGTG CGCCGCATCG CCCGCGTGGC CTTCGAGGCG 
GCCCGCAAAC GCAGCAGGAA GGTCTGCTCG GTGGACAAGG CCAACGTGCT GGCCGTGTCG 
CGCCTGTGGC GCGCCGTGGT CATCGAGGTG GCCAGGGAAT ACCCCGACGT GGAGCTGACC 
CACATGTACG TAGACAACGC GGCCATGCAG CTGGTGCGCT GGCCCGCCCA GTTCGACGTC 
ATCGTCACCG AGAACCTGTT CGGCGACATC CTGTCCGACG AGGCGGCGGT GATCACCGGG 
TCCATCGGCA TGCTGCCCTC GGCCTCGCTG GGCGCCAGCG GCCCCGGCAT CTTCGAGCCC 
ATCCACGGCT CCGCCCCGGA CATCGCCGGG CAGAACAAGG CCAACCCCGT GGCCACCATC 
CTTTCCGTGG CCATGATGCT GCGCTACACC TTCGGTCTGG AGAAGGAAGC CGTGGCCATC 
GAGCAGGCCG TCAGCGGCGT GCTGCGCGAA GGGTACCGCA CCGGCGACAT CATGGAAGAA 
GGCAAGACGC TGGTGGGCAC CGTGAGCATG GGGAACCTGG TGACCGAGCG GGTGTAA
 
Protein sequence
MDMKICLMPG DGIGPEIVEQ AVKVLDKVAK KFGHTVSYTN ALIGGAAIDA TGGPLPDETV 
AACKAADAVL LGAVGGPKWD TLPTAIRPEK GLLGIRKALG LFANLRPATL LPELAGACLL 
RADIAAQGLD VMVVRELTGG VYFGEPVCEE ELRDGLRTSY NTMIYNEEEV RRIARVAFEA 
ARKRSRKVCS VDKANVLAVS RLWRAVVIEV AREYPDVELT HMYVDNAAMQ LVRWPAQFDV 
IVTENLFGDI LSDEAAVITG SIGMLPSASL GASGPGIFEP IHGSAPDIAG QNKANPVATI 
LSVAMMLRYT FGLEKEAVAI EQAVSGVLRE GYRTGDIMEE GKTLVGTVSM GNLVTERV