Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1791 |
Symbol | |
ID | 7173707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2190882 |
End bp | 2192426 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643540306 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_002436203 |
Protein GI | 218886882 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 0.265436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG AATCCGGTCG CATCCGCATT TTCGACACCA CGTTGCGCGA CGGCGAACAG TCGCCCGGCG CCACCATGAA CCTTCAGGAA AAGATCCGCC TGGCCCGCCA GCTGGAAACC CTGGGCGTGG ACATCATGGA AGCCGGGTTC CCCGCCTCCA GCCAGGGCGA CTTCGAGGCC GTGCAGGCCA TCGCCCGCGC CGTGAAGGGT GTGGAGGTGG CGGGCCTGTG CCGCGCCATG CCCGCCGACA TCGACCGGGC CTGGGAGGCC GTGAAGGTGG CCGAAAACCC GCGTATCCAC ACCTTTCTCG CCACCTCGCC GGTGCACATG CAGTACAAGC TGCGCAAGGA GCCGGACCAG GTGGTGGAAA TGGCCGTGGC CGCCGTGCGC CATGCCGCCA AATACACCAG CAACGTGGAG TTCTCTGCCG AGGACGCTTC GCGCTCCAAC CCCGACTTTC TGGTGCGGGT GTTCGAGGCG GTGATCAACG CCGGGGCAAC CACCATCAAC GTGCCGGACA CCGTGGGCTA TGCCCAGCCC GAGGAATTCG GGCGGCTCAT CAGGTACGTC ATCGAAAACA CGCCCAACAG CCACAAGGCC GTGTTCAGCG TGCACTGCCA CAACGACCTC GGCATGGGCG TGGCCAACAC CCTTGCCGCG CTGAAGGCGG GCGCCCGCCA GGCGGAAGTG ACCATCAGCG GCATTGGCGA ACGGGCGGGC AACGCCTCGC TCGAGGAAAT CGTCATGGCC CTGCATACCC GGCGCGACTT CTACCAGCTG GACTGCGGCG TGGTGACCGA GCAGCTGTTC CCCACCTGCC GCCTGCTGTC CATGATCATC GGCCAGCCCA TTCCGCCCAA CAAGGCCATC GTGGGCGCCA ACGCCTTCGC GCACGAATCG GGCATCCACC AGGACGGGAT GCTCAAGAAC CGCGAAACGT ACGAGATCAT GACGCCGGAA TCCATCGGCA AGACCAAGAC AGACCTCGTC ATCGGCAAGC ATTCGGGCCG CAACGCCGTG AAGAACAAGC TGGACGAGCT TGGCTACCGG CTGGAGGAAG CCCAGCTCGT CACCGTGTTC GAGGCGGTAA AGAAGCTGGC GGACAAGAAG AAGCAGATTT ATGACGAGGA TATCGAGGCG CTGGTGCTTG AAGAGGTCTA CCGCCTGCCC GACCTGTACC GGCTGGTGAA CCTTTCCGTG CAGTGCAGCG ACACCGGCAT GCCCCCCACC GCCGCCGTGG TCATGGACGT CATGGGCGAG GTGAAGCGCG CCGCCGGGTT CGGCGTTGGC CCCATCGACG CGGTGTTCAA CGTCATCGGG GAAATAGTGG GCCGCGCGCC CGTGCTTGAA CGATACTCGG TCACCGCCAT CACCGGCGGC ACAGACGCCC AGGGCGAGGT GACCGTGCGC CTGCGGCAGA ACGGCAGCAG CGCGGTCGGA CGCGGGTCCG ACCCCGACAT CATACTGGCC AGCGCCCGCG CGTACGTGAA CGCGCTGAAC CGGCTGGCAA AGAAAGAAGA AGAGCAAGAG AAGGAGGGAA TCTAG
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Protein sequence | MTIESGRIRI FDTTLRDGEQ SPGATMNLQE KIRLARQLET LGVDIMEAGF PASSQGDFEA VQAIARAVKG VEVAGLCRAM PADIDRAWEA VKVAENPRIH TFLATSPVHM QYKLRKEPDQ VVEMAVAAVR HAAKYTSNVE FSAEDASRSN PDFLVRVFEA VINAGATTIN VPDTVGYAQP EEFGRLIRYV IENTPNSHKA VFSVHCHNDL GMGVANTLAA LKAGARQAEV TISGIGERAG NASLEEIVMA LHTRRDFYQL DCGVVTEQLF PTCRLLSMII GQPIPPNKAI VGANAFAHES GIHQDGMLKN RETYEIMTPE SIGKTKTDLV IGKHSGRNAV KNKLDELGYR LEEAQLVTVF EAVKKLADKK KQIYDEDIEA LVLEEVYRLP DLYRLVNLSV QCSDTGMPPT AAVVMDVMGE VKRAAGFGVG PIDAVFNVIG EIVGRAPVLE RYSVTAITGG TDAQGEVTVR LRQNGSSAVG RGSDPDIILA SARAYVNALN RLAKKEEEQE KEGI
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