Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1629 |
Symbol | |
ID | 7173543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2008369 |
End bp | 2009316 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643540146 |
Product | ABC transporter related |
Protein accession | YP_002436045 |
Protein GI | 218886724 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 116 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTG CGGCCCGCGC TTCCACTCCG CCCGACATGC ATTACGGACC CGGCATGCAC CACGGGCCCG GCATGTCTGG CGACCCCGCC GTGGTCTGCG CCGGGCTGCG CAAGCGCTAC GGCGAAGGGG CCGCCGCCGT GCACGCCCTG CGCGGCGTGG ACCTGACCGT GCAACGCGGC GAACTGCTCA TGCTGGTGGG TCCCTCCGGC TGCGGCAAGA CCACGCTCAT TTCGGTCATG GCGGGCATCC TCGACCCCAC GGAGGGCAGC TGCCGCATCC TGGGGCAGGA CATGGCCGCC CTGGCCCCCC GGCCCCGCGC GGCCTTTCGC GCCCGGAACA TCGGCTTCGT GTTCCAGGCC TACAATCTCA ATCCGGCCCT GACGGCGGCG GAGAACGTCT CCGTGCCGCT GCGCATCTGC GGCGCGCCGC CGCGCGAGGC CATGCGCAAG GCCGAAGCCG CGCTGGACCT GGTGGGGCTG GGCGACAAGG CGGAATCCGC CCCCGGCGAC CTTTCCGGCG GGCAGCAGCA GCGGGTAGCC ATTGCCCGCG CCCTGGTGCA CCAGCCGCAA CTGATCGTCT GCGACGAGCC CACCAGCGCC CTGGATCACG CCAACGGGCA GCGGGTCATG GAACTGCTGC GCCGGGTGGG CACCGTGGAT GGCCGGGCGC TGGTCATCGT CACCCACGAT GCCCGCATCT TCGAGTTTGC CGACCGCATC GCCGAACTGG ACGACGGCCG GGTGACCCGC GTGGGTACGC CCGGCGCCCT GTCCGCGCCG TCGGGCGTGC CGGTGGCGGC GGACATGCCC GGCGACGCCC CCGGCGACGC CCCCGGCGCG AAACCCGATC CGGCCTGCGC CAAAGCGTGG TCACCCGAAT GCGCAACCCC GCCCGGCGGC AATGCCACGG GCACGCCCGC GCGGATGCCT GGTCGCCGCG CGGACTGA
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Protein sequence | MDIAARASTP PDMHYGPGMH HGPGMSGDPA VVCAGLRKRY GEGAAAVHAL RGVDLTVQRG ELLMLVGPSG CGKTTLISVM AGILDPTEGS CRILGQDMAA LAPRPRAAFR ARNIGFVFQA YNLNPALTAA ENVSVPLRIC GAPPREAMRK AEAALDLVGL GDKAESAPGD LSGGQQQRVA IARALVHQPQ LIVCDEPTSA LDHANGQRVM ELLRRVGTVD GRALVIVTHD ARIFEFADRI AELDDGRVTR VGTPGALSAP SGVPVAADMP GDAPGDAPGA KPDPACAKAW SPECATPPGG NATGTPARMP GRRAD
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