Gene DvMF_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1586 
Symbol 
ID7173500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1954748 
End bp1955749 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID643540103 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002436002 
Protein GI218886681 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAC GCACCACCGC CCTGCTTGTC GCCCTGCTGG GTGTCGCCAT GCTGTTCGGC 
GCAACCGGCC AGGCCTTCGC GAAACAGAAA TTCATCGTGT ACACCTCGAT GAAGGAGTCG
CTCATCGGCA CGTTGAAAGA CGCGTTCGTC AAGCAGCATC CGGACATCGA CATGGACTAC
CAGTCCTCGG GCGCGGGCAA GATCATGGCC AAGATCGCGG CAGAGCGCGA ATCGGGCAAG
ATCCTGGCCG ACGTGCTGTG GACCAGCGAG GTTCCCGACT TCTACCAGAT GAAGGCGCAG
GGCCTGCTGG ACCCCTACGT GTCGCCCGAG GTGAAGAACA TCCTGAACCC CATCGCCGAC
TATGACGGTT CGTTCACCCC GGCGCGCCTG GGCACGCTGG GCATCGCCTA CAACACCCGG
TACGTGAAGC AGGCCCCGAC CTCCTGGCAG GACCTGATGA AGCCCGAATA CAAGGGCGCC
TTCGGCATCG CCAACCCGGC CCTTTCCGGC ACCTCGTACA TGAGCGTGGC CATGCTGGAA
AAGGCCTTCG GCTGGGAGTT CTTCAAGAAG CTGCGCGCCA ACGGCGCCAA GATGGGCAAG
GGGTCCGGCC AGGTGGTGGA CGACACCTCC TCGGGCGACC TAGTGGCCAG CCTGGCGGTG
GACTACATCA CCAACGACAA GATCGAGAAG GGCGCCACCA TCGCCCTGGT CTACCCGCAG
GAAATGCTGG TCATCCCCAG CCCGGTGGCC ATCATCAAGG GCTCGCCCAA CGTCGAGGCC
GCCCGCAAGT TCGTGGACTT CCTGCTGTCC AGGGAAGGCC AGGCCATCAT CGCCGGCGAA
GGCACGCTGC CCGTGCGCGC CGACGTGGAG GTGCCCGCCC GCTTCAAGCT GCCCACCCCC
GCCGACGCCG TGAAGCGCGC CATCAAGGTG GACTACCCCC AGATGATCGC CGAGAAGGAA
GACCGGGTGA AGACCTTCAC CGACATCATG CAGAGCAAGT AG
 
Protein sequence
MSRRTTALLV ALLGVAMLFG ATGQAFAKQK FIVYTSMKES LIGTLKDAFV KQHPDIDMDY 
QSSGAGKIMA KIAAERESGK ILADVLWTSE VPDFYQMKAQ GLLDPYVSPE VKNILNPIAD
YDGSFTPARL GTLGIAYNTR YVKQAPTSWQ DLMKPEYKGA FGIANPALSG TSYMSVAMLE
KAFGWEFFKK LRANGAKMGK GSGQVVDDTS SGDLVASLAV DYITNDKIEK GATIALVYPQ
EMLVIPSPVA IIKGSPNVEA ARKFVDFLLS REGQAIIAGE GTLPVRADVE VPARFKLPTP
ADAVKRAIKV DYPQMIAEKE DRVKTFTDIM QSK