Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1493 |
Symbol | |
ID | 7173404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1833593 |
End bp | 1835533 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643540007 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_002435909 |
Protein GI | 218886588 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGCA TACTCGTGGT GGACGACGAG GCCATGGTCC GCACCATGCT GGCCGAGGTG GCCGTGGGCA TGGGGCACGA GGCCCTCACC GCCGCCACTC TGGACGAGGG GCTGCGCCTT GCCGCCACCG GTGCGCCCGA CGTGGTCTAC CTGGACGTGC TGCTGCCCGA CGGCAACGGC CTGGCCCACG TCACCACCTT CGGTCGCCTG CCATGCGCCC CGGAGATCAT CGTGGTGACC GGCTTCGGCG ATGCGGACGG CGCGGAAACC GCCCTACGCC ACGGGGTGTG GGAATACCTG CAAAAGCCCC TGCGCGTTCA GGACATCACC CTTTCGCTGT CCCGCGTGCT GGCCTATCGC GGCGGCAGGG CTAGGCGCGG GCTTGGCGGC GGGGCCAACG GCACGGTGTC CGGCACAGCG CAGGCTGGCC AGACCGACAA TGAACCGGGA GCGCCCACCG CTGCCGCGCC GTCTTCCGCT TTGCCCTCCG CCCCGCTGTG GCGCGAGGGC ATCGTGGGCA ACAGCCCGGC CCTCGATGCC GCGCTGGAAC TGATGGCCGA GGCGGCGGCC AGTTCGGTCA ACGTGCTGGT GCTGGGCGAA ACCGGCACCG GCAAGGAACT GTTCGCCCGC GCCGTGCACC GCAACAGCGC ACGGGCGGCG GGGCCGTTCG TCACCCTGGA CTGTGCGTCG CTGACCGAAA ACCTGGTGGA AAGCCAGCTC TTCGGCCACG TGCGCGGGGC CTTCACCGGC GCGGACCGCA GCCGTGACGG GCTGCTGCGC CTGGCCCACG GGGGTACGCT GTTCCTGGAC GAAATCGGCG ACCTGCCCCT GTCCATCCAG GGGGCCTTCC TGCGGGCGCT GGAACTGCGG CGCTTTCGCC CGGTGGGCGC CAGCAGGGAG GTGGAGAGCG ACTTCCGTCT GGTGGCGGCC ACCAACAAGG ATCTGCATGA AATGGTGCGG CTGGACATGT TCCGCAGCGA CCTGCTGTAC CGGCTGCGCG GCCTGACCAT CACCCTGCCC CCGCTGCGCG AGCGCACGGA AGACCTGCCG GAACTGTGCG CCTGGGCCGT GGACCGGTTC TGCCAACGGC ACGACCTGCC CCCCAAGTTT CCCGCCGAGG ATTTTCTGGA AACCGTGGCC AGCTACCCGT GGCCGGGCAA CGTGCGTGAA CTGGTGCACG CCGTGGAGCG CGCCTGCGCC GCCGCGCGCG ACGAAACCAC CCTGTACGCG CGGCAGTTGC CCACGGAAAT CCGGGTCCGG GTGGCCCGCG ACAGAATGGA CGGACACACG GCAGGATTGT CAGGGCTGGC GGGAACGGTG GGTCCGGCAG GCCCGGCGGG CCCGGCGGGG TTGTCGGGAT TGGCGTCTAT CCCCGCCACG ACCCGACAGA CCAGGCAGGC CGGGCAGGCT GGTCAAGCAG GACGGGCAGG ACAGGCAGGC CAAGGAGCCC ATGGAGATTG GTCAGGCATG GCCGGGCCAG TGCCCCCGCC TCCCTCCCCG GCCACGACAG CGCGGGGGGC GGCGGCCTTC ATGGCGGGCA GAGCCTCCGA TGCCGTGCCC GCATGGCCGC CACACGCCAA CGGGGCGAGT TCCCTATCGG AATGGTCAGG CGCGCACGCA GTGACCCCGC AGCGACTTTC CGGATTACGG GGTCTGGCCG GATTACGGGA TCTGGCCGGA ACGCGGGACA TGGGCGCTCC GGGGGCTGCG ATCGAAGCGG GAGCCATGCG GGGACAGACG GGCATGGACC TGCCGGGTTC CGCGCCGGAC GGCGTCCCGC CCACCCTGCG CACCCACAAG GCCGACGCGG AACGCGCCTA CCTGGCCCGC ATGCTGGCTC ACTGTCGCGG CGACATTCGC GAGGCGGCTC GACTGGCCGA TGTTTCGCGC GGGCACTTTT ACGAACTGCT CAAGAAACAC GGCCTCGGGA AGACCGACTG A
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Protein sequence | MACILVVDDE AMVRTMLAEV AVGMGHEALT AATLDEGLRL AATGAPDVVY LDVLLPDGNG LAHVTTFGRL PCAPEIIVVT GFGDADGAET ALRHGVWEYL QKPLRVQDIT LSLSRVLAYR GGRARRGLGG GANGTVSGTA QAGQTDNEPG APTAAAPSSA LPSAPLWREG IVGNSPALDA ALELMAEAAA SSVNVLVLGE TGTGKELFAR AVHRNSARAA GPFVTLDCAS LTENLVESQL FGHVRGAFTG ADRSRDGLLR LAHGGTLFLD EIGDLPLSIQ GAFLRALELR RFRPVGASRE VESDFRLVAA TNKDLHEMVR LDMFRSDLLY RLRGLTITLP PLRERTEDLP ELCAWAVDRF CQRHDLPPKF PAEDFLETVA SYPWPGNVRE LVHAVERACA AARDETTLYA RQLPTEIRVR VARDRMDGHT AGLSGLAGTV GPAGPAGPAG LSGLASIPAT TRQTRQAGQA GQAGRAGQAG QGAHGDWSGM AGPVPPPPSP ATTARGAAAF MAGRASDAVP AWPPHANGAS SLSEWSGAHA VTPQRLSGLR GLAGLRDLAG TRDMGAPGAA IEAGAMRGQT GMDLPGSAPD GVPPTLRTHK ADAERAYLAR MLAHCRGDIR EAARLADVSR GHFYELLKKH GLGKTD
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