| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1354 |
|---|
| Symbol | |
|---|
| ID | 7173258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 1652559 |
|---|
| End bp | 1656845 |
|---|
| Gene Length | 4287 bp |
|---|
| Protein Length | 1428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643539862 |
|---|
| Product | protein of unknown function DUF748 |
|---|
| Protein accession | YP_002435771 |
|---|
| Protein GI | 218886450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA AGCCGGAAAA GAGTCTGTCG GGGTGGTCGC CAGCGGCCAT TGCAGTGCGC
GGCAAGGCGT GGTGGGCCCT GCGAAGGGTG CGCCGCTGGA CGTACACCGT TGCCGCCATT
GTCGCGGCCT GGGGCGTGCT GGCCGGGTTG GCCATGCCGC CGCTGTTGCG CGGCGTGCTG
GAAGACCAAC TGTCCGACAA ACTGCGGGTG CGCTGCACCG TGGAAAAGGT GCGCTTCAAC
CCCTATTCGT GGGCGCTGTC CATCCAGGGC GTGCGCGTGC CCAATCCCAC CGGCGACGGC
GACATGCTGA CCTTCGACGC GCTGGAATTC TCGCCCGGCC TGTCCGCCGC GCTGCGCCTT
GCGCCGGTGC TGGCCTACGT GCGGCTGGTG AACCCGGTGG TGTACGTGGC CCATTTCGGC
GACGGGCGCT ATTCCTTTTC GGAATTCATT CCCGCGGACG GAGAAGGCGA GGGCGGGAAG
CAGGACCGAG CGGACCGATC GGAGGGGGCG AACAAACCGC TGTTCCCCTT TGCGGCCAGC
AACTTCGAGG TGGTCAACGG CACGGTGATC TTTCACGACG CGCCGCAGAA GACCATCCAC
ACCATCACGG AATTGCACTT CGTGGTGCCG TTCACCTCCA CCATGGAGCG TGACCGCGAG
CGGATCATCA CCCCCAGCCT CAACGCCACC GTGGACGGCA GGGCGCTGAA CGTGCAGGGG
CGATTGCTGC CCTTTGCCGA GCACCTGCGC ACCGAGTTCG ACGTGGTCAC CGACGAGGTG
GACCTGACCC AGTACCGCGA ATACCTGGCC GCGTTCACGC CGCTGCGCGT GGAATCGGGG
CGGCTGGGCG TGAACCTGAA GCTGGTGGTG GAGCAGCCCG CCGCGCACGA CGTGGAGTTC
GGGCTGGCGG GGTCCGTGAC CCTGAACGAC CTGCGCGTGA ACGCGCCCGA CGGCAAGGAA
GCGGTGTTGG GGCTGACCTC CGGCGTGGTG GAGGTGGAGG AATTTTCGCT GCTGGACCGG
CACGTGGACG TGCGCCGGGT TGCCCTGGAC GGGTTGCTGG CGCGGGTGGG GCGGTTGGCC
GACGGCAGCA TCGACTGGGT GGGCTTTGTT GCCCCGGCGG GCGGAAAGCG GCAGGAGCCC
GATCAGTCCA AACAGGACCA GTCCAAGCAG GCTCAGGCGA AACAGGATCG GGCAGGGCAG
ATCGACGGCG CACGGAATGA TCGCCAGACC GGCCCGCGGA ATGGAACCAT GGCCGCCACT
GCCGCCGTTG CATCCAACGG GGCCAATGGA ACGGGGGCAG GCGGAGCGAC AGGAAAGAAT
CCGGCGTCGC CCCCGGCTTC GGGCAAAACG GCTGCGGAGC AACTGCCTTT CGTGGTCAAC
GTGCGCACCC TGGGGCTGCG CGATGCCACG GTGGTCTGGA AGGATGCCAC GGTGCCCGGC
GGCGCGGTGG TGCGCCTGAG CGGCCTTGAT GCGACCCTGA CCGATTTCGC CACGCCCGGC
GGCAAGCAGC AGCCCAAGGG CGGCGGGGCG TTCACCGCGT CGCTGCGCAT GGACGGCGGC
GGTGCGGCGG GTGAAGCCGC CAAACCCGGC CCCGGTGGCA AACCGGGCGC AGGCGCGGGC
ACCCTGAAGG CCGAGGGCAC GCTGACATTG GAACCGCTGG GCGTCACCCT GCGGCTGGAC
GCGCGCGACC TGCCCCTGCT GCCAGTGCGC GGCTACGTGG CCCAGGCGGC GCCAGCCCTG
TCGGTGGACG CAGGGGCGGC GGGCGTGCAG GGCGAGATCG ATCTTTCGCT GGCCGCGCCG
GATGCGCCGG GGCTTGTGGT GCGCAAGGGC GCGGCGCAGG TGTCGGGCCT TGTCCTGTCG
CTTTCGGGGT CGCTTTCCGG GTCGCTTTCC GGCCAGAAGC AGCCGTCCGT GAGCCTGGGC
AAGCTGGATG TGGCCGACAC CTCGGTGGAC CTTGCGGCGC GCAACGTGGC CGTGGGGCCG
GTGACGCTGA CCGGGCCCGA CGTGCGGGTG GTGCGCGGCA AGGACGGCGC CATCGACCTT
GCGGCGCTGG CGGGGGGAAC CGCACCGGCG GAGTCCGCCA AGTCCCAGCC AACCGGGACC
CGATCCGTAC GGGGCAAGGG GCAGGAACGC CCGGCGGCGC GTGGCGCTTC ACGCACCGCG
CCGCAGAAAC CCGTCGCCGC GCCGGACGGG CCGGAGTGGC AGGTGTCCGT GGCCTCGCTG
CGCGTGGACG AGGGGCGGGT GACCTTCGAG GACCGGCAGC CCAGGGATGC GGGCGTGCTT
TCACTGGAAG GGATGCGTCT GGTCACCGGC CCGCTGTCGC TGCAACGCGG TGCGCCGCTG
GACGTGGATT TTTCCGCGCG CTGGCAGAAG CAGGGCACCA TCGGCATCAA GGCCAAGGGC
ACGGCGCAGC CGCTGCACAT GACCGTGGAC AGCAGGTTGG CCAAGGTAGA CCTGCGCCCG
CTGGACCCGT ACCTGGGCGA GGCGACCGAC CTGCTGTTCG GCAGCGGCGA GGTATCGTCG
GAGCTCAAGG TGGCCCTGCG CGAGCAGCCC GCCCCGGCGA CGCCGGCAGG CAGGGCACGC
CGCGCGTCCA CATCCGGCGG ACAGGGGGCG GAACCGGCGC TGGACATCAG CGTGGAGGGC
GCGGCCCGGC TGGACAATCT GTCGTTGAAG CTGGCCGGGG GCAAGCAGGA GCTTGCCTCG
CTGCGGCGGT TTGCGGTGCG CGGGTTGCGC TTCGGCCAGC AGCCTTCGGG CGACCTTTCC
CTGCGCGTGC AGGAGGTGGG GCTGGAAAAG CCCAAGCTTT CGGTGATGGT GTTCAAGGAC
GGCTCCACCA GCATCAGCCG GGCCATGGGG GCGAAGCCCC CGGCGGCGGA GAAGGACGCG
AAGCCCCCGG CGGCGGCGAA GGACGCGAAG GCTTCGGCAG GCGCCACCGC GCAGCCTCCC
AAGGCTGCGT CCGGTCCCGC CACGGATTCG GCATCGCCGC CACCCGCGTC TTCCGCCGCC
TCTGGTTCCT CTGGTGCGTC CGCACCGGGC GACGGTACGG AGGTTGCGGC GCGTCCCAAC
GCGGGACCGT TCACCACGCT GGAGGTGGGC AGCCTGTCCA TTTCCGGCGG GGCGCTGCGC
TTCCGCGACG AGCGCATGTC CCCGGCCTAT GCCGCCGAAG TGTCCGACAT CGAGGGGCGC
ATCTCCGGCG TCTCGCTGGA CCCGGCCTCG CGGGCCGAGG TGCAGTTGCG CGCGGGCATA
GAAGGGGTGC CGGTGCTGGT GGGCGGCACG GTGAATCCGC TCATTCATCC CGTGTTCGCG
GACATGCGTT TCACCATGTC CGGGCTGGAT CTGGTGCCCC TGTCGCCCTA CGCGGTGCAG
TACATCGCCT ATCCCGTGGA GCACGGGCGT TTCTCCGCAG ACGTGGCCGT AAAGGCGGAA
AACTGGGTGC TGGACGCCGA CAACCATTTC ACCCTCAGCC AGATCGAACT GGGCAGCAAG
GACAACAGGC CCGATGCGCC CAATTACCCG GTAAAGCTGG GGCTGGCCCT GTTGCAGGAC
ATGAGCGGCA ACGTGGACCT GCGCCTGCCC GTGAAGGGGC GGCTGGACGA CCCGGAATTC
CGCCTGGGCG GCGTGGTCAT GCAGGCCGTG CTGAACCTGA TGGTCAAGGT GGTCACCTCG
CCCTTTGCGC TGGTGGGCAG CGTGCTCAGT CTGGGGTCCG GCGGCAGGGA CATGCGTTAC
GTGGAATTTC CGCCCGGCGT GGCAACGCTG AACGAGGCGG CGGAAAAGGA TCTGCGCGCC
GTGGTCGAGG TGTTGCGCCA GCGTCCGCGC CTGAAGCTGG AAGTGCAGGG CGCGGCGGAA
CCGGATGGCG ACACGCGCGG CCTGAAGGAA CAGGCCCTGC TGCGCGCCCT GCGCGAGGCC
AAGCACGCCT CGCTGTCGCG CGCCGAGCGG GCGCGGGTGA ACGTGGACGA CCTGATCATC
GACAAGGACG AATACGAGGA TCTGCTGGAC GAGGTGTACA AGGACGCGCC CTTCGAAAAG
CCGCGCAACG TGGTCGGCTT CACCAAATCG CAACCTGCTG ACGTGATGGA GGCCGCGCTG
AAGGAACACC ACGAGGTGAC CCCGGAGGCG CTGAAGGAAC TGGCCACCGC ACGGTCCAAG
GCCGTGCGCG ACAAGCTGCT GGAAATCGAT CCGACGCTGG GCGAGCGGGT GTTCCTGTCC
GGGGCCAAGG TGGCGCCTGC CGCCGGTGCG GAGGGTGGGG ATGGCGCCAA GGGCGGGGGG
AGCAGGGTTA ATTTGGGATT GCAGTAG
|
|---|
| Protein sequence | MSAKPEKSLS GWSPAAIAVR GKAWWALRRV RRWTYTVAAI VAAWGVLAGL AMPPLLRGVL
EDQLSDKLRV RCTVEKVRFN PYSWALSIQG VRVPNPTGDG DMLTFDALEF SPGLSAALRL
APVLAYVRLV NPVVYVAHFG DGRYSFSEFI PADGEGEGGK QDRADRSEGA NKPLFPFAAS
NFEVVNGTVI FHDAPQKTIH TITELHFVVP FTSTMERDRE RIITPSLNAT VDGRALNVQG
RLLPFAEHLR TEFDVVTDEV DLTQYREYLA AFTPLRVESG RLGVNLKLVV EQPAAHDVEF
GLAGSVTLND LRVNAPDGKE AVLGLTSGVV EVEEFSLLDR HVDVRRVALD GLLARVGRLA
DGSIDWVGFV APAGGKRQEP DQSKQDQSKQ AQAKQDRAGQ IDGARNDRQT GPRNGTMAAT
AAVASNGANG TGAGGATGKN PASPPASGKT AAEQLPFVVN VRTLGLRDAT VVWKDATVPG
GAVVRLSGLD ATLTDFATPG GKQQPKGGGA FTASLRMDGG GAAGEAAKPG PGGKPGAGAG
TLKAEGTLTL EPLGVTLRLD ARDLPLLPVR GYVAQAAPAL SVDAGAAGVQ GEIDLSLAAP
DAPGLVVRKG AAQVSGLVLS LSGSLSGSLS GQKQPSVSLG KLDVADTSVD LAARNVAVGP
VTLTGPDVRV VRGKDGAIDL AALAGGTAPA ESAKSQPTGT RSVRGKGQER PAARGASRTA
PQKPVAAPDG PEWQVSVASL RVDEGRVTFE DRQPRDAGVL SLEGMRLVTG PLSLQRGAPL
DVDFSARWQK QGTIGIKAKG TAQPLHMTVD SRLAKVDLRP LDPYLGEATD LLFGSGEVSS
ELKVALREQP APATPAGRAR RASTSGGQGA EPALDISVEG AARLDNLSLK LAGGKQELAS
LRRFAVRGLR FGQQPSGDLS LRVQEVGLEK PKLSVMVFKD GSTSISRAMG AKPPAAEKDA
KPPAAAKDAK ASAGATAQPP KAASGPATDS ASPPPASSAA SGSSGASAPG DGTEVAARPN
AGPFTTLEVG SLSISGGALR FRDERMSPAY AAEVSDIEGR ISGVSLDPAS RAEVQLRAGI
EGVPVLVGGT VNPLIHPVFA DMRFTMSGLD LVPLSPYAVQ YIAYPVEHGR FSADVAVKAE
NWVLDADNHF TLSQIELGSK DNRPDAPNYP VKLGLALLQD MSGNVDLRLP VKGRLDDPEF
RLGGVVMQAV LNLMVKVVTS PFALVGSVLS LGSGGRDMRY VEFPPGVATL NEAAEKDLRA
VVEVLRQRPR LKLEVQGAAE PDGDTRGLKE QALLRALREA KHASLSRAER ARVNVDDLII
DKDEYEDLLD EVYKDAPFEK PRNVVGFTKS QPADVMEAAL KEHHEVTPEA LKELATARSK
AVRDKLLEID PTLGERVFLS GAKVAPAAGA EGGDGAKGGG SRVNLGLQ
|
|---|
| |