Gene DvMF_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1324 
Symbol 
ID7173228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1616435 
End bp1617487 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content66% 
IMG OID643539832 
Productsigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_002435741 
Protein GI218886420 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.02567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG ACACCAGCGG CATCATCGGC CAAAGCACAT CGCTCAGGGA CGTTTTCCGC 
ATTCTGGCCA AAGTGGCCCC CACCGACAGC ACCGTGCTGG TCACGGGCGA ATCGGGCACC
GGCAAGGAAC TTCTGGTGCG CGCGCTGCAT TCCAACAGCC AGCGCCGGTC CATGCCCTTC
GTGCCCATCA ACTGCGGGGC CATTCCCAAG GAACTTCTGG AATCGGAGCT CTTCGGCCAC
GAGAAGGGCG CCTTCACCCA CGCCATCCGT TCGCGGCCCG GCAGGTTCGA ACTGGCCGAC
GGCGGCACCA TCTTCCTGGA CGAAATCGGC GAGATGGACC TGACGTTGCA GGTCAAGATC
CTGCGCGTGC TGCAGGAAAA GGAAATCGAG CGCGTGGGCG GCGCGGGCGT GAAGAAGGTG
GACGTGCGCA TCGTGGCCGC CACCAACCGC GACCTCGAGC GCGAGGTAGC CGCCGGGCGC
TTCCGCGAAG ACCTGTACTA CCGCCTCAAC GTCATCCCCC TGCACCTGCC CGCCCTGCGC
GAGCGCGGCG GCGACATCCT GGTGCTGGCC GAACATTTCA TGCGCCGCTT CTGCGAACGC
AAGGGCCGCC GCTGCCTGGC GCTGGCGCCC GACACGCGCA AGGTGCTGGC CGCCTATTCG
TGGCCGGGCA ACGTGCGCGA GCTGGAAAAC TTCATGGAGC GGCTCAGCAT CCTCGCCGAC
GACGACGTGG TGCCCCCCGC CGACCTGCCC CGCAAGATAC TGGACGAGGT GGGCGACATC
GTCTCGCTGC CGGAGCCGAC CCCGCCCGAC CCGCTGCCCG TGGCCACGGG CGCCGCATCC
GGTGGCATGC CTGCCGGTTT CAGCTGGCCC ACCATCACCG ATCTGCGCGA CAAGGGCATG
AACCTGAAGG ATTTTCTGGA CACGGTGGAA GAACGCCTGC TGGACGAGGC CCTGACCATG
GCCGAGGGCG TGAAGAACCA GGCGGCGGAA ATCCTGGGCA TCAAGCGCAC CACGCTCATC
GAGAAGCTGA AGAAGAAACG CGCCGACTCG TGA
 
Protein sequence
MDLDTSGIIG QSTSLRDVFR ILAKVAPTDS TVLVTGESGT GKELLVRALH SNSQRRSMPF 
VPINCGAIPK ELLESELFGH EKGAFTHAIR SRPGRFELAD GGTIFLDEIG EMDLTLQVKI
LRVLQEKEIE RVGGAGVKKV DVRIVAATNR DLEREVAAGR FREDLYYRLN VIPLHLPALR
ERGGDILVLA EHFMRRFCER KGRRCLALAP DTRKVLAAYS WPGNVRELEN FMERLSILAD
DDVVPPADLP RKILDEVGDI VSLPEPTPPD PLPVATGAAS GGMPAGFSWP TITDLRDKGM
NLKDFLDTVE ERLLDEALTM AEGVKNQAAE ILGIKRTTLI EKLKKKRADS