Gene DvMF_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1258 
Symbol 
ID7173161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1554829 
End bp1555737 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID643539765 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_002435675 
Protein GI218886354 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.000000122601 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCCATA TGTTCACCAC GCCGCTGGTC GTCCTTTCTC TCTGCCTTGC CCTCTGCCTT 
TCGGCGCCGG GCGCCCTCGC GGACGACGCC TCCACCGGAC GCATTTTCAG GTTCGGCGTC 
ATCACGCTGA ACCATCCGCT GGTCATCTAC CAGCAGTACC AGCCCTTCCT CGACTACCTT 
TCCGAGCGCC AGCCGTGGCG CTTTGAACTG GTACTGGAGC AGCGCTACTC GGCCATCGTC 
GACCGCCTCC AGGCCGGTAC CCTGGACATC GCCCTGCTGG CTGGCCGCAC CTTCCTGCAG 
GCGCGCGAAC GCACGCCGCT CGAGCCCATA TGCGCCGTGA CGGGCGTGGA CGGCACCCCC 
ACCATCCGCA GCCTCATCGT GGTGCGCGAT GACCGCGAGG ACATCCGCAC CGTGGCCGAC 
CTTGCCGACA AGCGCTTCGC CTTCGGCTCG CCGGACTCCA CCGCAAGCTA TCTCATTCCG 
CTGGATTATC TGAAGCAGCA TGGCATTACC CTCAGCTCCT TCTCGCGCTG GAACAATCTG 
GGCACCCACG ACGCCGTTGC CCGAGCCGTG CTGCGGGGCG AGTACGACGC CGGGGCCGTG 
GGCGAACCCA TGGCCATGCG CTATCTGGGC TCCGGGCTTC GCATGCTGGC GGCCACGCCG 
CCGTTCCCGG GCTTCATCAT AGTTGCCCGG GCCGCCGTGC CCGAACCCGT GCGGGAGGCC 
CTTCGCAAGA CCCTGCTGGC CATCGACCCC GCATCGCCCG AGGTGACCGC CCGCTCCTCC 
GGATGGAACG AGGTGCTGCG CCACGGATTC GTTACGGTGG ACACCTCGGT GTACGAAGCC 
TTCCGGGCCA TGGAGACGCG CTTGGGGCTG CCTTCCCAGG AACAGCCGGG GACGGAGGAA 
AAACCGTGA
 
Protein sequence
MGHMFTTPLV VLSLCLALCL SAPGALADDA STGRIFRFGV ITLNHPLVIY QQYQPFLDYL 
SERQPWRFEL VLEQRYSAIV DRLQAGTLDI ALLAGRTFLQ ARERTPLEPI CAVTGVDGTP 
TIRSLIVVRD DREDIRTVAD LADKRFAFGS PDSTASYLIP LDYLKQHGIT LSSFSRWNNL 
GTHDAVARAV LRGEYDAGAV GEPMAMRYLG SGLRMLAATP PFPGFIIVAR AAVPEPVREA 
LRKTLLAIDP ASPEVTARSS GWNEVLRHGF VTVDTSVYEA FRAMETRLGL PSQEQPGTEE 
KP