Gene DvMF_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1250 
Symbol 
ID7173153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1545595 
End bp1546176 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID643539758 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002435668 
Protein GI218886347 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.00015051 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCACAT CTACCATCTT CCGCCCCGGC AGCGCCTGCT TCCCCGGCCT CGTCGACCAT 
ACCTCCAGGC TGCCGGCCTG CCGACTGGTG CCATCCGGTT TGCTGGCCGC CCTGGCACTG 
TGCGTCATCA CGCTGTCAGG CGGTTGTGCG GCCCGGCACG CGAGCACGCC CGCCGCCCTC 
CAGACCGCCG ACCAGACCTC CGGTCAGTCC GCCCTCCAGC CCTCTTCGCA GGCCGTCAGT 
TCCGTCCAGC TCGTCCAGTC GGATCGCAGC TGGGATGGCT CCACGCTGCC CGCGTATCCG 
CAGGGCCAGC CACAGGTCAC CATCCTGCGC ATCACCATTC CCGCCGGGGC GCGGCTGCCC 
CTGCATCATC ACCCGGTGAT CAACGCCGGG GTGCTTACAC GCGGCCAGTT GCTGGTCACC 
ACGGAGGACG GCAAGGAACT GCGCCTCGCG GCGGGCGACC CCATCGTGGA GGTGGTGAAC 
AACCCGCACC AGGGCTTCAA CCCCGGCAGC GAACCCGCCG AAATCATCGT CTTCTACGCC 
GGGCAGGCGG GCACTCCGCT GGCCGTCAAG CAGGGGCAGT AG
 
Protein sequence
MRTSTIFRPG SACFPGLVDH TSRLPACRLV PSGLLAALAL CVITLSGGCA ARHASTPAAL 
QTADQTSGQS ALQPSSQAVS SVQLVQSDRS WDGSTLPAYP QGQPQVTILR ITIPAGARLP 
LHHHPVINAG VLTRGQLLVT TEDGKELRLA AGDPIVEVVN NPHQGFNPGS EPAEIIVFYA 
GQAGTPLAVK QGQ