Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1099 |
Symbol | |
ID | 7173000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1345563 |
End bp | 1347122 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643539610 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002435521 |
Protein GI | 218886200 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.051717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAG ATCCCGAATC GGTCAACCGC TGGCTCATCA CCCTGGCGGT GATGGTGCCC ACGCTCATCG AAATCCTGGA TACCAGCGTG GCCAACGTCG CGCTCAAGCA CATTCAGGGC AGCCTGGCCG CAGGCGAGGA AGAGGTGACC TGGGTGCTCA CCTCGTACCT GGTGGCCAAC GCCATCGTCA TCCCCATGAG CGGGTGGCTG GCGCGGCTCA TGGGGCGCAA GCGCTTCCTC ATGTTGTCCA TCGCCGTGTT CACCGCCAGT TCGCTGCTGT GCGGGGCGGC CACCAGCCTG GCGCAGATCA TCCTGTTCCG CATTTTTCAG GGGCTTGGCG GCGGCGGGCT GCAACCCATG TCGCAGGCCA TCCTGATGGA AACCTTTCCG CCCCAGCAGC GCGGCATGGC CATGGGCATC TTCGGCGTGG GGGTGGTGCT GGGGCCCATT CTGGGGCCGC TGCTGGGCGG CTACCTGACG GACAATTTCA CCTGGCGGTG GATCTTCTAC ATCAACCTGC CGGTGGGGCT GCTGGCCCTG TATCTGGCCG GGGCCTTCCT GTTCGACCCG CCGTACATGG AACGCCGCCA GCGCGGTGAA GTGGTGGACT ACCTGGGGCT GGCCCTGCTG ACCACGGGCA TCGGCGCGTT GCAGATCGTG CTGGACAAGG GCCAGCAGGA CGACTGGTTC AGTTCGCCCT TCATCACCGT GCTGGCCGTG GTTTCCGCCG TGTCGCTGGT GGGGCTGGTG TTCTGGGAAC TGCGCCACCC AAGGCCGGTG CTGGATTTCC GCATCCTGAA AAACCGCAGC TTCGCCATTG GCAACGTCGT GATGTTCTTC GGCTTCTTCG CCTTTTTCGG GTCCATCGTG TTGCTGCCGC TGTTCCTGCA AGGGCTGATG GGCTACACCG CCTATCTCGC GGGTCTCGTG CTGGGGCCGG GGGGAATGCT GGCCCTGGTG TTCATGCCCG TGGCGGGCAA GCTGACCGAA CGCATCGACG CCCGCTGGAT GCTGGCCTTC GGCATGCTGG TGTGCGCGTA TTCACTGCAC ATCATGGCCG GGTTCAACCT GTACATCGAC TTCGGCACGG CGGCCTTTGC CCGTGTGCTG CAAGGCATTG CCATGCCGTT CTTCTTTGTT TCGCTGTCGG TGGTCACCTT CGCCTACGTC CCGCGCGAGG CCATGAACAC CGCATCGCCG CTGTACAACC TGCTGCGCAA CCTGGGCGGC TCGTTCGGCG TGGCCTTCGT CACCACGCTG CTGGCCCGGC GCACCCAGTA CCACCACAGC GTGCTGGCGG AAGACATGAC GCCCCTCTCG CCTGCCTACG AGATGAGCTT CGAGCAGATT CGCAACGGGC TGGCCATGCA GCTTGGCGAG GTGGCAGACC TTGCCGAACG CACCCGCATG GTGATCTACC AGATGCTCCA GCGAGAAGCA TCCGCCCTGG CCTTCAACGA CGCCTTTTTT TCGCAGGGGG CCATCTTCCT GCTGCTGTTC TTCTGCGTGT GGTTCATGCG CAGGCCGCCG CGCGGCAAGC ATGAGGGGTT TGTGGAGTAG
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Protein sequence | MSKDPESVNR WLITLAVMVP TLIEILDTSV ANVALKHIQG SLAAGEEEVT WVLTSYLVAN AIVIPMSGWL ARLMGRKRFL MLSIAVFTAS SLLCGAATSL AQIILFRIFQ GLGGGGLQPM SQAILMETFP PQQRGMAMGI FGVGVVLGPI LGPLLGGYLT DNFTWRWIFY INLPVGLLAL YLAGAFLFDP PYMERRQRGE VVDYLGLALL TTGIGALQIV LDKGQQDDWF SSPFITVLAV VSAVSLVGLV FWELRHPRPV LDFRILKNRS FAIGNVVMFF GFFAFFGSIV LLPLFLQGLM GYTAYLAGLV LGPGGMLALV FMPVAGKLTE RIDARWMLAF GMLVCAYSLH IMAGFNLYID FGTAAFARVL QGIAMPFFFV SLSVVTFAYV PREAMNTASP LYNLLRNLGG SFGVAFVTTL LARRTQYHHS VLAEDMTPLS PAYEMSFEQI RNGLAMQLGE VADLAERTRM VIYQMLQREA SALAFNDAFF SQGAIFLLLF FCVWFMRRPP RGKHEGFVE
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