| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1062 |
|---|
| Symbol | |
|---|
| ID | 7172963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 1302815 |
|---|
| End bp | 1304407 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643539573 |
|---|
| Product | Tail Collar domain protein |
|---|
| Protein accession | YP_002435484 |
|---|
| Protein GI | 218886163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG TATCGACGAA CACCGTCGAA CTGTACACCG GCAACGGCAC GCAGACGGAG
TGGCCGGTGA CCTTCCCGTT CCTGCGGCCC GAGGACGTGC GGGCCGTGGT GAGCGGGACG
GGCGGCGACA GGGTGCTGGC CTACGGCACC GACTACGTGG CCGCCGCGCT GCCGGGCGGC
GGGGGCAGCG TGACCACCGC ACCGGGCGCG CCCGGCATGG TGCACGCGGG CGAACATCTG
ACGCTGTGGC TGGACCAGCC CTTCACGCAG GAGATGGATC TGCGCAATAC CGGCGTGCTG
GACGCGGAAA TGCTGGAGCG CGGCTTTGAC CGGCTGACCC TGATGGCCCA GCAACTGCGC
GAAGAGGTGG GCCGCTGCGT CAAGGTGCCG ATGACCGACC AGTCCACGCG GCCCGACGCC
CTGCTGGAGG GCATCACCGC CAACGTGGGC CGCGCGGAAC TGGCGGCACT GGACGCGCAA
GACCGGGCGG CATCCGCCAC GGCCAGCGCG GTACGGGCGG AATCCTCCGT CTCCGGCCTT
GATGCGGCCC TGACCGGCGT GCATCAACTG CGCGAAGAGG TGCTCCAGAC CGTGGCGGAT
GCGCGGCAGG ATGTGCTGGC CTGCGCAGCG TTCGTGCCCA TCGGGGCCAT TCTGGACTTT
CCGGTGAACA CCGTCCCGAC GGGCTTTCTT GTTTGCGCCG GGCAGGTGGT GACGCGGACG
GCGTATCCGG ACCTGGTCAC CTACCTGACC GGGGGCACCG TGGCGGTCAA CGCCACCCTG
CCCGACCTTC GCGGCGAGTT CCGGCGCGGG GCGGACCTTG GGCGCGGTGT GGATGCCGGG
CGCGTGGTGG GCAGTGCGCA GGGTGACGCC ATACGAAATA TCACGGGTTC GCTTTATAAC
TACATCCAGA ATAATGCGAG TCAGGAAAAC GGGGCGCTCC GCACTCAAGT TGCCAGCACG
CTAAACTCGC CGTTCGGTGC AGGCACGATT ATGTCGTGGT CCACGCTTTC CATTGATGCA
TCGCGGCAGG TTCCCACAGC ATCCGAAAAC CGCCCCCGCA ACATTGCTGT TGTGCCATGC
ATCAAGGCGT ACCATGCCCC CATGAGCGCC GCACCGGTGG ACCTTGCGGA CGCGCTGGAC
AGGCTGGACG ACCTTGCGGC GATTGTCAGC CCCAATGTGG GAAAATTCTG CACCATGAAG
TGTGTTGGAG GGGGGCAAAC CATACCCGTG GCCGGGGCCG TCACGGTTGC AGCGCAGGGA
GGGCAAGCAG TCGCGGCTGG TGAAAGCTGG ACAGGTCCAT CTGATGGTTC ACTTTCAATC
ACTATACCAT CTGATGGGTT GTACGAAATC AGGGGCACAT TCACGGGGAT GGCGGCTGCA
TCCGGACATT TTTCCGGCTT CATAACTGTA AACAGCGCCC TCGTGCTCCA CTCCTACTGC
TATGCCTATG TGTATTCATG GACGACAGGA TGCCCGGAAT GCACCATGAG CCTGAAAACA
GGGGACGTGA TACGTATGCA AGCGAGTACG GGCGTGGCGC TGACCAGTGG CGGAACAGGG
ACTGTCACCC TGACTGCACG GAGGGTGCGC TAA
|
|---|
| Protein sequence | MTIVSTNTVE LYTGNGTQTE WPVTFPFLRP EDVRAVVSGT GGDRVLAYGT DYVAAALPGG
GGSVTTAPGA PGMVHAGEHL TLWLDQPFTQ EMDLRNTGVL DAEMLERGFD RLTLMAQQLR
EEVGRCVKVP MTDQSTRPDA LLEGITANVG RAELAALDAQ DRAASATASA VRAESSVSGL
DAALTGVHQL REEVLQTVAD ARQDVLACAA FVPIGAILDF PVNTVPTGFL VCAGQVVTRT
AYPDLVTYLT GGTVAVNATL PDLRGEFRRG ADLGRGVDAG RVVGSAQGDA IRNITGSLYN
YIQNNASQEN GALRTQVAST LNSPFGAGTI MSWSTLSIDA SRQVPTASEN RPRNIAVVPC
IKAYHAPMSA APVDLADALD RLDDLAAIVS PNVGKFCTMK CVGGGQTIPV AGAVTVAAQG
GQAVAAGESW TGPSDGSLSI TIPSDGLYEI RGTFTGMAAA SGHFSGFITV NSALVLHSYC
YAYVYSWTTG CPECTMSLKT GDVIRMQAST GVALTSGGTG TVTLTARRVR
|
|---|
| |