Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1045 |
Symbol | |
ID | 7172941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1269672 |
End bp | 1270865 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643539552 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_002435468 |
Protein GI | 218886147 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAAGA TAGAGATCCG CGACCTGACC AAGATATTCG GCCCGGTGCC GGAAAAGGCG CTGGCCATGG TCCGCGCCGG CAAGCCCAAG GACGAGATAT ACAAGCGCAC CAAGCATGCC GTGGGCGTCA ACCGCGCCAC CTTCGACGTG GACGAGGGCG AGATCGTGGT GGTCATGGGC CTTTCCGGCA GCGGCAAATC CACCCTGGTG CGCTGCCTGA ACCGGCTCAT CGAACCCACC GACGGCACGG TGCGCATTGA CGGCACCGAC GTGACCACTC TTTCGGTGAA GGATCTGCGT GCCCTGCGCC AGCGCACCTT CGGCATGGTG TTTCAGAATT TTGCCCTTTT TCCGCACCGC ACCGTGCTTG AAAATGCCGA ATACGGGCTG GAGGTGATGG GGGCAGCCAA AGCCACTCGT CGCGACAAGG CGGCCGAGGC CCTGGCCCGC GTGGGCCTGG CCGGGTGGGA AGCGGCCCGG CCCGGACAGC TTTCCGGCGG CATGCAGCAG CGCGTGGGCC TGGCCCGCGC CCTTGCGCTG GACCCGGACA TCCTGCTGAT GGACGAGGCC TTCAGTGCGC TGGACCCCCT GATCCGGCGC GACATGCAGG ACGAGTTGCT GCGCCTTCAG GACGACGTGC GCAAGACCAT CGTGTTCATC AGCCATGACC TGGACGAGGC GCTGAAGATC GGCGACCGCA TCGTGCTCAT GCGCGACGGG GCCGTGGTGC AGGTGGGCAC GCCGGAAGAT ATCCTGACCA GCCCGGCGGA CGACTACGTG GCCCGCTTCG TGGCCGACGT GGACATTGCC CGCGTGCTGA CGGCGGGTAC GGTGATGAAG CGGTCCGAGG CGGTGGCGGT GCTGGGCGTG GACGGCCCGC GCACGGCCCT GCGCAAGATG CGCAACCACG CCATCGCCAC CCTGTTCGTG CTCGACCGCA ACCACAAGTT GGTGGGGCTG GTCACCGCCG ACGACATCGT CGAGCACCTG GCGGGCGGCG AGCGCGACCT TGCGGCCATC ATGCGCACCG ACATCACCAC GGTATCCACC GATGCCCCCG CCTCCGAACT CATTCCCCTC ATGGCCGGGC TGCCGCACCC GCTGGCCGTC ACCGACGAGC GCGGACGGCT GGCCGGGGTC ATCGTGCGCG GGCTGTTGTT GGGTGCACTG GCTGAACGCG GAGGGAACGC CTGA
|
Protein sequence | MAKIEIRDLT KIFGPVPEKA LAMVRAGKPK DEIYKRTKHA VGVNRATFDV DEGEIVVVMG LSGSGKSTLV RCLNRLIEPT DGTVRIDGTD VTTLSVKDLR ALRQRTFGMV FQNFALFPHR TVLENAEYGL EVMGAAKATR RDKAAEALAR VGLAGWEAAR PGQLSGGMQQ RVGLARALAL DPDILLMDEA FSALDPLIRR DMQDELLRLQ DDVRKTIVFI SHDLDEALKI GDRIVLMRDG AVVQVGTPED ILTSPADDYV ARFVADVDIA RVLTAGTVMK RSEAVAVLGV DGPRTALRKM RNHAIATLFV LDRNHKLVGL VTADDIVEHL AGGERDLAAI MRTDITTVST DAPASELIPL MAGLPHPLAV TDERGRLAGV IVRGLLLGAL AERGGNA
|
| |