| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1037 |
|---|
| Symbol | |
|---|
| ID | 7172933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 1258958 |
|---|
| End bp | 1259761 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643539544 |
|---|
| Product | peptidase A24A domain protein |
|---|
| Protein accession | YP_002435460 |
|---|
| Protein GI | 218886139 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 0.869777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTACA CCGACCCCGC CGTCTTTCCG TGGCTTGCGC TGGTGCTGGG CCTTGTGCTT
GGCAGTTTCT ACAACGTGTG CATCCACCGG GCCATCGAGG GCCAGTCGCT GCTGTGGCCG
CCGTCGCACT GCCCGCACTG CGCCGCGCGG CTGCGCCCGT GGCATCTTGT GCCCATCCTC
AGCTATCTTG CGCTACGCGG ACGCTGCCAT GCCTGCGGCC AGCGCATCAG CCCCCGTTAT
CCCACTGTCG AGGCCGTGTC CGGCCTGCTG GCCCTGCTGC TGGCCTTTCG CTTTGGCGCC
ACGTGGCCCT TCGCCGTGTA CATGGTGTTC GGCGGGGCGC TGCTGGTGGC CTCGTTCATC
GATTTCGAAA CGTTCATCCT GCCCGATGTC ATCACCCTGA CCGGCGCCGT GGCCGCCCCG
GTGGCCGCCG TGCTGCTGCT GGACATGCCC CTGGCCGACA GCCTGATCGG CGCGGTGGCG
GGCGGCGGCG TGTTCTGGCT GGTGCTGGCG GGCTTCAAGC GGGTGCGCGG CATCGACGGC
ATGGGCCTTG GCGACGTGAA GCTGATGGTG CTCATCGGCG GACTGTGCGG CTGGCAGGCC
CTGCCCGTGG TCACGCTGCT GGCGGGCCTT TCGGCCCTGC TGGCCGCCGC GTGGTTCCTG
CGCCGTCGCG AAGAGGGCCA GTCCGCCCGC GAGGTGGCCA TTCCCTTCGG TCCGTTCCTC
AGCCTGGGGG CCATAATCTA CATGCTGTAC GGCCCGGCGC TGGTGCGCTG GTGGTTCGGG
TTTGTCACCG GAAAGCCGGT TTAG
|
|---|
| Protein sequence | MPYTDPAVFP WLALVLGLVL GSFYNVCIHR AIEGQSLLWP PSHCPHCAAR LRPWHLVPIL
SYLALRGRCH ACGQRISPRY PTVEAVSGLL ALLLAFRFGA TWPFAVYMVF GGALLVASFI
DFETFILPDV ITLTGAVAAP VAAVLLLDMP LADSLIGAVA GGGVFWLVLA GFKRVRGIDG
MGLGDVKLMV LIGGLCGWQA LPVVTLLAGL SALLAAAWFL RRREEGQSAR EVAIPFGPFL
SLGAIIYMLY GPALVRWWFG FVTGKPV
|
|---|
| |