| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1014 |
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| Symbol | |
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| ID | 7172909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1229596 |
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| End bp | 1231254 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643539520 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002435437 |
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| Protein GI | 218886116 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 0.737518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCTG GCCGTACCAT CAAGGCGGAA CTCCGGTTTC ATTCGTTACT GCTCATCCTG
CTGCCGCTGG CCCTGTCGCT GGCGGCGTTC TACGGCGTGC TGCGCACCGA AGGGCTGCGC
AAGGCCCAGG GCGAAATGCA GGCGGAACTG CGGCACCACC GCTTCGACGT GGAACGCTGG
CTGGGCTACC GCCTGGCCGA CGTGGTGCAC GTGTCGCGCA CCGATGCGGT GCGCACCATG
GATCTGCCCG CCATGGCGCG CGACTTTCAT GCCTTTCTCG ACTCCCACGG CGACTTCCGC
TCCCTGGTCT ACGTGAATGC CGCAGGGCGC ACGGTGCTCG ACTTCGACAT GCCGGAAGGC
GGCGTGGACA TTTCCGACCG CGAATACTTC CTGCGGGGGC GGCAGGGGCA GCCGTTCATT
TCGCGTGTGC TGACGGGGCG CACATCGGGC AAGTCCATCG TGATCTTTTC ATCCCCGGTG
CTGAATCCGC AGGGCGACTT TGCGGGGCTG GTCTTCGGCG TGGTGCGCAT CAACGAACTG
CTGGAGATGG TCAGCAGCCT GCGGCGCACT CCGGTGGATC CCTCCTTCCT GGTGGACGCC
TCCACCGGCG TCCCCCTGCT GGCCCCGGAA GACGCCCGTT CCATCCCGTT GCCCTCGCTG
GACGCGCCCA TCGACGGCCC GGCCATCTAC CGCAATCGTG ACGATGCCGA GGTGCTGGGG
GTGGGGCTGC CGCTCAAGAA CGGCGAATGG CTGCTTGTGC AGGAACGCGC CGTGGGTGAC
ATACTGGGCG ACATGCACCG GTTGCTGCTG CTCCTGCTGG CGGTGTCGGG CCTGACCATT
GCGGTGTGTA CTCCCTTTCT GCTGCGCCTT GCGCGGCGGG TCACCGGGCC CGTCGAGCGA
ATTTCGGCCA TGTCCGAGCG CATCATGGCC GGGGAATACG GCAATGCCTG CCCCGGTCTC
GACGTGGCGG CCATGCCCCC GGAACTGGAG CGGCTGTACC GCAATTTCTG CCGCATGGCC
GAGCGCATCG GCACCCACGT TGGCGAGCTG GAGCGCCTGT CCGGCACCGA CGAACTGACC
GGGCTGGCCA ACCGCCGCCT GCTGGCCGAC GCGGGCGCGC GCATCGTCAG CATCTGCCGC
CGGGCCGGGC AGCCGTGCGC CTGCCTGATG CTGGACCTGG ACCACTTCAA GCACATCAAC
GACGTACACG GGCATGCCAC CGGCGACGAG GTGTTGCGCA GACTGGCCGC CGCCATCATG
GCCACGGTGC GTTCGTCCGA CTTCGCGGTG CGCATGGGCG GCGAGGAATT CGCCATCATC
GCGCCCAATA CCGATGCCAC GCACGCCATG GCCCTGGCCG AGCGGCTGCG CCGCAATGTC
GAGCGCATCG ACCTGCGCCA GGCGGACATG CCCGTGCCGG TGGCCATCAG CGTGGGGGTG
GCAGGCATGA CCGTTACGCC GCGCTACGGT GCCGGGCCGC TGGAAGACCT TCTGGCCAGG
GCCGACCACG CGCTGTACCG GGCCAAACAG GCGGGCCGCA ACCGGGTGGT GCTGTGGGAC
GATGCCGAGC GCGCCGGGGG AGAGGCATGG GGCGCCCAAG GCGACGAAGG ACAGGAGCAG
GGCGTTGCCC GGTTGCGCGG GCCGCTGAGC GGTTCCTGA
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| Protein sequence | MRPGRTIKAE LRFHSLLLIL LPLALSLAAF YGVLRTEGLR KAQGEMQAEL RHHRFDVERW
LGYRLADVVH VSRTDAVRTM DLPAMARDFH AFLDSHGDFR SLVYVNAAGR TVLDFDMPEG
GVDISDREYF LRGRQGQPFI SRVLTGRTSG KSIVIFSSPV LNPQGDFAGL VFGVVRINEL
LEMVSSLRRT PVDPSFLVDA STGVPLLAPE DARSIPLPSL DAPIDGPAIY RNRDDAEVLG
VGLPLKNGEW LLVQERAVGD ILGDMHRLLL LLLAVSGLTI AVCTPFLLRL ARRVTGPVER
ISAMSERIMA GEYGNACPGL DVAAMPPELE RLYRNFCRMA ERIGTHVGEL ERLSGTDELT
GLANRRLLAD AGARIVSICR RAGQPCACLM LDLDHFKHIN DVHGHATGDE VLRRLAAAIM
ATVRSSDFAV RMGGEEFAII APNTDATHAM ALAERLRRNV ERIDLRQADM PVPVAISVGV
AGMTVTPRYG AGPLEDLLAR ADHALYRAKQ AGRNRVVLWD DAERAGGEAW GAQGDEGQEQ
GVARLRGPLS GS
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