| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0938 |
|---|
| Symbol | |
|---|
| ID | 7172832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 1138022 |
|---|
| End bp | 1139467 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643539443 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_002435361 |
|---|
| Protein GI | 218886040 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CCGCCGAACG CAAGCCCGCC GGGGGCCGGA AGATCGCCCC GCGCGTGGAC
ATGCCCTGCC AGCCCGCCGG GGAACGCATC CGCAACTTCG AAGAAGTGGC CCTGGGCTAC
ACGCAGCAGA TGGCCACGGA AGAGGCCCTG CGCTGCCTGC AATGCAAGAA CCCCAAGTGC
GTCAAGGGCT GCCCCGTGGA AGTGCCCATC AGGGACTTCA TCGGCCAGCT TGCCAAGGGC
GACCTGGAAG GCGCCTACCG CACCATCAAG TCCACCAACA GCCTGCCCGG CGTGTGTGGC
CGGGTGTGCC CGCAGGAAAA CCAGTGCGAG GGAGCCTGCG TGCTGAACGC CAAGGGCCAG
CCCGTGGCCA TAGGCCGCCT GGAACGCTAC GTGGCCGATA CCTACATGGC CCTCGACGCC
TGCGACCATC TTGCCGCCCG GCTGACCTGC CCGGCGGTGG ACCCGGAACT GCGCGTGGCC
TGCATCGGCA GCGGCCCGGC CAGCCTGACC GTGGCGGGGT ACCTTTCCGC GCGCGGGATC
AAGGTGACCG TGTTCGAGGC CCTGCACGAG GTGGGCGGGG TGCTGGTGTA CGGCATTCCC
GAATTCCGCC TGCCGAAATC GGCCATCGTG GAAAAGGAAG TGCAGGCCCT GCGCACCCAG
GAAGTGGACT TCGTCACCAA CTGGGTAGGC GGGCGCACCT TTTCGATCGA CGACCTGTTC
GCCGAAGGCT ACCGCGCCGT GTTCATCGGC GTGGGCGCGG GGCTGCCGCG CTTTCTCGGC
GTGCCCGGCG AGAACCTGAC CGGCGTTTTT TCCGCCAACG AATACCTTAC CCGCGTCAAC
CTGGGCCGGG CCTACGCCTT TCCCGACTAC GACACCCCGG TCTACCAGGG CCGCAACGTG
ACGGTGTACG GCGGCGGCAA CGTGGCCATG GACGCGGCGC GCACGGCGCT GCGCCTGGGC
GCGGAATCGG TGCGCATCGT CTACCGCCGC ACCCGCGACG AACTGCCCGC CCGGCACGAG
GAACTGGAAC ACGCCGAGGA AGAAGGCGTG ATCCTGGAAC TGCTGGCCAA CCCGGTGGCC
TTCCACGGCG ACGAAATGGG CCGCCTGACC GGCGTCACCC TGCAACGCAT GCAGCTTGGC
GAGCCGGACG CATCGGGCCG CCGCAGCCCC GTGCCGGTGG AAGGCGACAC CTACGAACTG
CCCACCGACC TTGCCGTCAT TGCCGTGGGT ACTCGCCCCA ACCCCATCCT GTTGGAAGCC
ACGCCGCAAC TGAAGCTGAG CAGGCGCGGC TACATCGAGG TGGACGAGGA AACCGGCGAA
ACCTCCATCC CCAACGTGTT CGCCGGGGGC GACATCGTTA CCGGCGCGGC CACGGTCATC
CTGGCCATGG GCGCGGGACG CAGGGCGGCC AAGGAAATCC GCCGTCGCCT GAAGGACGGG
GAGTAG
|
|---|
| Protein sequence | MTATAERKPA GGRKIAPRVD MPCQPAGERI RNFEEVALGY TQQMATEEAL RCLQCKNPKC
VKGCPVEVPI RDFIGQLAKG DLEGAYRTIK STNSLPGVCG RVCPQENQCE GACVLNAKGQ
PVAIGRLERY VADTYMALDA CDHLAARLTC PAVDPELRVA CIGSGPASLT VAGYLSARGI
KVTVFEALHE VGGVLVYGIP EFRLPKSAIV EKEVQALRTQ EVDFVTNWVG GRTFSIDDLF
AEGYRAVFIG VGAGLPRFLG VPGENLTGVF SANEYLTRVN LGRAYAFPDY DTPVYQGRNV
TVYGGGNVAM DAARTALRLG AESVRIVYRR TRDELPARHE ELEHAEEEGV ILELLANPVA
FHGDEMGRLT GVTLQRMQLG EPDASGRRSP VPVEGDTYEL PTDLAVIAVG TRPNPILLEA
TPQLKLSRRG YIEVDEETGE TSIPNVFAGG DIVTGAATVI LAMGAGRRAA KEIRRRLKDG
E
|
|---|
| |