| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0887 |
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| Symbol | |
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| ID | 7172776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1070845 |
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| End bp | 1072341 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643539387 |
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| Product | single-stranded nucleic acid binding R3H domain protein |
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| Protein accession | YP_002435310 |
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| Protein GI | 218885989 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1847] Predicted RNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.00650736 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGGAT ACAAGGAGTT TCAGGGGAAA AGCCTCGACG ATGCCATTCG CGAGGCCTGC
TCCTACTTCG ACGCCCCTCG CGAGAAGCTC GAGATAGACA TTGTCCAGGA TGCCAAGTCC
GGCATCTTCG GCATCGTGGG GGCGCGCAAG GCCAAGATCC GCGCGCGCCG CGCCCAGATA
GGGCAGATTG GCCGTCTGGC CCAATCCGCC CAACCCTCTC AGTCGGGGCA GTCCGTTGCT
CCCGCCCCTG TTGCCGCTGT CTCCAGCGAC GCCGCTTCCA CCACGCAGTC CCGTGAAGAA
CGGGGCGCTG CCACCGCAGA AGCGGCGGAA GCGGACGCCG GCGAATCTCG TGCCTCCCGT
GCCCACGGTC CGCGTGAAGA TCGTCCCCGC GAAGAGCGTT CCAGAGACGA GCAGCCCGGC
CGTGAACGCA GTGAGGCCGC CCCGGCCATG GCCGGGCAAG ACGCCGGGGC CGATGGCCGT
GACGACGCCG AATCCGGCGA CGATGACGAC GAGCACAGGC CGGAGGGCGA ACGCAACGGT
CGCCGTCGCC GCCGTGGAGG CCGTGGCCGC CGTGAGCGTG ACGGCGAGGC CCGTGGCGAG
AATGCTGACC GGGGCGATCG GGGCGACAGG CCTGGCCAGT CCCGCGAAAC CGACGGTGAA
GCCGCCGAAG GGCCCGCATC CGGCGATTCC CGCACCGACG GCAGATACGC CCGCGCGCCC
CGTGCGCCGC AGGCCCCGCG CGGGCCGCGT CCCGCTCGTC AGCCGCAGGA TGGAGAATCC
GGCGCGCAGG CGGGGCAGCA GGATCGCCGT GGCGGTCCCC GCCGCAATGG CGAGCGTTCG
GAACGACCGG ACAGGTCGGA GAGACCGGCC AGCCCGGCCC GGCCAGCCCG GCCAGCCCGC
CCGGAGAGTC AGGAACGGCG CCCCCGGCCT GATAGGCCCG GCGGTGACGC GGGGCTGGAC
ATGCTGGACA TGCTGGACGG GGCCGACGAG CACGGCGGCG ACGGCCTGCC GGAAATCCCG
CTGGAACAGC TGGACCGGGA GCAGGTGACC CAGGTGGCCG TGGAGGTCAT GGAACGCTTG
GTTACCCCGG TCATCGGCGA AGCGGGCTTC TCCGTGGAAC TGGCCGAAGG CCGCGTCAAT
GTTTCCGTGG ATTGCGGCGA GAATTCCGGG CTGCTCATAG GCCGCGAGGG GCAGACCCTG
TCGGCGCTGC AGTACCTGGC CTCGCGCATC GTTTCGCGCA AGCTCGGCGC CTCGGTGCGG
GTGCAGCTGG ATTCCGGCGA CTACCGCGAA CGCCAGGACG ACAAGCTGCG CGACATCGCC
CTGCACCTGG CCGAAAAGGT GCGCGCCACC GGCAAGCCGC AGTCCACCCG TCCGCTCAGC
TCGTACCACC GCCGGGTGGT GCACGTGACG TTGCAGGACG ATGAAGAGGT GGTTACCCGC
AGCAAGGGTG ACGGCCCGCT GAAGCGGGTG ATCATCATGC GCAAGAAGAA AGGCTAG
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| Protein sequence | MDGYKEFQGK SLDDAIREAC SYFDAPREKL EIDIVQDAKS GIFGIVGARK AKIRARRAQI
GQIGRLAQSA QPSQSGQSVA PAPVAAVSSD AASTTQSREE RGAATAEAAE ADAGESRASR
AHGPREDRPR EERSRDEQPG RERSEAAPAM AGQDAGADGR DDAESGDDDD EHRPEGERNG
RRRRRGGRGR RERDGEARGE NADRGDRGDR PGQSRETDGE AAEGPASGDS RTDGRYARAP
RAPQAPRGPR PARQPQDGES GAQAGQQDRR GGPRRNGERS ERPDRSERPA SPARPARPAR
PESQERRPRP DRPGGDAGLD MLDMLDGADE HGGDGLPEIP LEQLDREQVT QVAVEVMERL
VTPVIGEAGF SVELAEGRVN VSVDCGENSG LLIGREGQTL SALQYLASRI VSRKLGASVR
VQLDSGDYRE RQDDKLRDIA LHLAEKVRAT GKPQSTRPLS SYHRRVVHVT LQDDEEVVTR
SKGDGPLKRV IIMRKKKG
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