| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0877 |
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| Symbol | alaS |
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| ID | 7172766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1058114 |
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| End bp | 1060753 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643539378 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002435301 |
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| Protein GI | 218885980 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.438968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAACCG CCAACGAAAT CCGGCGCCGG TTCCTTGAAT TCTTCCAGTC GCAGGGCCAC
GAGATCGTGC GCTCTTCTTC CCTCGTGCCC AAGGACGACC CCTCGCTGCT GTTCACCAAC
GCGGGGATGG TGCAGTTCAA GAAGATTTTC CTGGGGCAGG AAAAGCGCGG CTACGTGCGG
GCCACCACCT CGCAGAAGTG CCTGCGCGTG GGCGGCAAGC ACAACGACCT CGAAAACGTG
GGCCGCACCG CGCGCCACCA CACCTTTTTC GAAATGCTGG GCAACTTCTC GTTCGGCGAC
TATTTCAAGG AAGACGCCAT CAAGTTCGCC TGGAAGTTCC TGACCGAAGA CCTGAAGCTG
CCCAAGGAAC GCCTGTACGC CACCGTTTTC CGTGACGACG ACGAGGCGCG CGACCTGTGG
CTGGCGCACA CCGACATCCC GGCGGAACGC ATCTACCGCA TGGGCGAGAA GGACAACTTC
TGGTCCATGG GCGATACCGG CCCCTGCGGC CCGTGCTCGG AAATCCTCAT CGACCAGGGC
GAGCACATGA CCTGCGGGCC GGACTGCGGC ATCGGCAAGT GCGACTGCGA CCGCTACCTG
GAAATCTGGA ACCTGGTGTT CATGCAGTAC GACCAGGCCG CCGACGGCAC CCGCACCGCG
CTGCCCAAGC CCTCCATCGA CACGGGCATG GGGCTGGAGC GCATCGCCGC CGTGTGCCAG
GGCGTGTACT CGAACTTCGA CACCGACCTG TTCCAGGCCA TCATCCAGTA CACCTGCGGC
ATCGCCGGGG TGTCCTATCG CGCCAACGAC GAGACGGACA CCGCCCTGCG CGTCATCGCC
GACCACAGCC GTTCCATGGC CTTCATGATC ACCGACGGCA TCCTGCCCTC CAACGAGGGG
CGCGGCTACG TGCTGCGCCG CCTGATCCGC CGCGCCTACC GCTTCGGGCG GCTCATCGGG
CAGACCGGCA CCTTCCTGCA CAAGACCGCC CTGAAGGTGG TCGAGGTGAT GGGCGACGAC
TACCCCGAAT TGCGCGGCAA CGCCGATTTC ATGGCCCGCG TGGTGCGCGA GGAAGAAGAG
CGCTTCAACC GCACCCTGGA CAAGGGGCTG GCCCTGCTGG AAGAGGAACT GGAAAGCCTG
CGCGGCGCGG GCAGCACCCG CGTGGCGGGC GACGTGGCCT TCAAGCTGTA CGACACCTAC
GGCTTCCCGC TGGACATCGT GAACGACATC GCGGAAAAGC GCGGCTTCAC GGTGGACGAG
GAAGGTTTCC GCACCCTGAT GGCCGAACAG AAGGAACGCG CCAAGGCCGC CTGGAAGGGA
TCGGGCGAAT CGGACATCGC CTCGCGCTTC CACGCCCTGC TCGAAGAAGG CCTGCGCTCG
GAATTCATCG GCTACGACCA CCTTTCGGGC GACAGCCGCG TGGTGGCCCT GCTGGATGCC
ACCGGCCTGC CCAGCGAAGG ACTGCCCAAG GGCGCCAAGG GCTACCTGGT GGCCACCCGC
ACCCCGTTCT ACGGCGCCTC GGGCGGCCAG ACGGGCGACC CTGGCTCCAT CACCTCGCCC
TCGGGCAAGG CCCGTGTGCT GGACACCCTG AAGCCCTCGC CCGAACTCAC CGTGCACCAG
ATCGAAACGG TGGACGGCGA AATCCTGCCC GACCAGGAAG TGCACCTGCA GGTTGAAGAG
GACGAGCGCG TGGCCTCGGC CCGCAACCAC ACCTGCACCC ACCTGCTGCA CGCAGCCCTG
CGCCGCGTGC TGGGCGACCA CGTCAAGCAG GCCGGGTCGC TGGTGGCCCC CGACCGCCTG
CGCTTCGACT TCACCCACAT CGCCGCCATG ACGCCGGAAG AAATCGCCGC CGTGGAGCGC
GAGGTGAACC GGGTGATCCT GGCCAACCTG CCGCTGGAAA CCGACCATAT GGCCTACGAC
GCCGCGCTGA CCCGGGGGGC CATGGCCCTG TTCGGCGAAA AGTACGGCGA CGAAGTCCGC
GTGGTGGCCA TTGCCGACGA ATCGGTGGAA TTGTGCGGCG GCACGCACCT GCGCGCCACC
GGCCAGGCCG GGCTGTTCCT GATCCTGTCC GAAGGCGGCG TGGCCGCCGG GGTGCGCCGC
ATCGAGGCCA TCACCGGCTG GAACGCCCTG CGCATGGTCA TGGACCAGCG CGCCGAACTG
GGGCAGGTGG CCGGGCTGCT GAAGGCCCGC TCCGGAGAGA TCGTGCCCCG CGTGGAGGCC
CTGCAGAAGG ACGTGAAGAG CCTGCGCAAG GATCTGGAAA AGGCCAGCTC GCAGGCCACC
TCGGGCCAGG GCCGCAACAT CATGGACGAA CTGGCCGAGA TCAACGGCGT GAAGGTGCTG
GCCGCCAAGG TGGAAGTGCC CAACGTGAAG GCCCTGCGCG ACCTGATGGA CGACGTGCGC
TCCAAGCTGC CCTCGGGCAT TGCCTGCCTG GCCGCCCCCG ACGGCGACAA GGTGAGCCTG
ATCGTGGCCG TTTCCAAGGA CCTGCACGAC CGCTTCACCG CACCGGCCCT GATCAAGGCC
GTGGCAGCCG CCGTGGGCGG CTCCGGCGGC GGGCGGCCCG ACATGGCCCA GGCCGGGGGC
ACCAACCCGG CGGGCATTGA CGAGGCGTTC GATATCCTGC GCAAGACCAT CGCGGGATAA
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| Protein sequence | MITANEIRRR FLEFFQSQGH EIVRSSSLVP KDDPSLLFTN AGMVQFKKIF LGQEKRGYVR
ATTSQKCLRV GGKHNDLENV GRTARHHTFF EMLGNFSFGD YFKEDAIKFA WKFLTEDLKL
PKERLYATVF RDDDEARDLW LAHTDIPAER IYRMGEKDNF WSMGDTGPCG PCSEILIDQG
EHMTCGPDCG IGKCDCDRYL EIWNLVFMQY DQAADGTRTA LPKPSIDTGM GLERIAAVCQ
GVYSNFDTDL FQAIIQYTCG IAGVSYRAND ETDTALRVIA DHSRSMAFMI TDGILPSNEG
RGYVLRRLIR RAYRFGRLIG QTGTFLHKTA LKVVEVMGDD YPELRGNADF MARVVREEEE
RFNRTLDKGL ALLEEELESL RGAGSTRVAG DVAFKLYDTY GFPLDIVNDI AEKRGFTVDE
EGFRTLMAEQ KERAKAAWKG SGESDIASRF HALLEEGLRS EFIGYDHLSG DSRVVALLDA
TGLPSEGLPK GAKGYLVATR TPFYGASGGQ TGDPGSITSP SGKARVLDTL KPSPELTVHQ
IETVDGEILP DQEVHLQVEE DERVASARNH TCTHLLHAAL RRVLGDHVKQ AGSLVAPDRL
RFDFTHIAAM TPEEIAAVER EVNRVILANL PLETDHMAYD AALTRGAMAL FGEKYGDEVR
VVAIADESVE LCGGTHLRAT GQAGLFLILS EGGVAAGVRR IEAITGWNAL RMVMDQRAEL
GQVAGLLKAR SGEIVPRVEA LQKDVKSLRK DLEKASSQAT SGQGRNIMDE LAEINGVKVL
AAKVEVPNVK ALRDLMDDVR SKLPSGIACL AAPDGDKVSL IVAVSKDLHD RFTAPALIKA
VAAAVGGSGG GRPDMAQAGG TNPAGIDEAF DILRKTIAG
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