| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0788 |
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| Symbol | |
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| ID | 7172677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 947079 |
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| End bp | 948809 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643539290 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002435213 |
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| Protein GI | 218885892 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.301156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA CCGCTTCACC CGCGCCGCGC GCCACGCGCG CAGGCCTGTA CCTTCTGGCG
TTTCTGCTGT GCCTGCTGCT GGCCGCCTGC GGCGACTCCG CCCCCCGGGG CGGCAAGGAC
GGCGGCCAGA ACGGCACCAC GGGTGCCGGG GGCAACGCCA CCTCGGCCCA GGGGGGGCAG
GCCGCCGCGC CAACGCCCGG AGAACCGGTC ACCGGCGACA GGATCATTCT CGGCACCATC
GGAGAACCGT CCAACCTGCT GCCGTTCATC GCGTCCGACG CGTCGTCGCA CGAGGTCAGC
GATCAGATTT TCGTGGCCGC GCTGCGCTAC GACAAGGACC TGAACATCGA GAAGTGGGCC
GCCGCCTCGT GCGAGGTGCT GGAAAACGGC ACCCTGCTGC GCTTCACCCT GCGCGACGAC
ATCCGCTGGG AGGACGGCAA GCCCCTGACC GCCGACGACG TGGAGTTCAC CTACAAGCTG
ATGGTGGACC CCAAGACCCC CACCCCCTAC GCCGAGGACT ACCTGGCCAT CCAGGAATTC
CGCAAGACGG GGCCGCTGTC GTTCGAGGTG CGCTACGCCA AGCCCTTTGC CCGCTCGCTG
ATCACCTGGA TGCACGGCAT CATGCCGAAG CACCTGCTGG AAGGGCAGGA CCTGATGAAC
ACGCCCTTCT CGCGCAAGCC CGTGGGGGCA GGACCGTACC GGCTGAAGGA ATGGGAGGCG
GGCACCCGCC TGACCCTGGA GGCCAGCCCC AGCTATTTCC TGGGCCGCCC CTACATCGAC
GAGGTGGTCT ACCGGATCAT CCCCGACCTC TCCACCATGT TCCTGGAACT GAAGGCCCAG
CGCCTGGACA TGATGAACCT GAGCCCGCAG CAGTACCTGC ACCAGACCAA CGGGGCCGAA
TGGGACATGG CCTGGCGCAA GTTCCAGTAC CTGTCCTTCG GCTACAGCTA TCTTGGCTAC
AACCTGTCGC TGCCCATGTT CAGGGATGTG AAGGTGCGCC AGGCGCTTAC CTGCGCCATA
GACCGCAAGG CGCTGGTGGC CGGGGTGCTG CTGGGGCAGG GCATGCCCAC GGTGGGCCCG
TACAAGCCGG GCACCTGGGT ATACAATGAC AAAATTGATG ATTATCCGTA TGATCCTGCC
AAGGCCAGGG AACTGCTGGC CCAGGCAGGC TGGGTCGACA CCAACGGCGA CGGCCTTCTG
GACAAGGACG GCGCGCCCTT CGCGTTCACC ATCCTGACCA ACCAGGGCAA CGACCAGCGC
ATCAAGGCCG CCACCATCAT CCAGAGCCAG CTCAAGTCCG TGGGCATCGA CGTGAAGATA
CGCACGGTGG AGTGGGCGGC CTTCATCAAG GAATTCGTGG ACAAGGGGCG CTTCGACGCC
GTGCTGCTGG GCTGGAACAT CCTGCAAGAC CCCGACCTGT ACGACGTGTG GCACTCGTCC
AAAGCCGTGC CCGGCGGGCT GAACTTCGTG GGTTACAAGA ACCCGGAGGT GGACGACCTG
CTGGAACGCG CCCGTTCCAC CTTCGACCAG GCCGAGCGCA AGAAGCTGTA CGACAGGTTC
CAGGAAATCC TGCACCGCGA CCAGCCGTAC TGCTTCCTGT ACACGCCGTA TTCGCTGCCC
ATCGTCAGTT CGCGTTTCCA GGGGCTGGAA CCCGCTCCGG CGGGGCTGAC CCACAATTTC
ACCCGCTGGT GGACCCCGAG GGAGCAGCAG CGGTACCGCA TGCAACAGTA G
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| Protein sequence | MNRTASPAPR ATRAGLYLLA FLLCLLLAAC GDSAPRGGKD GGQNGTTGAG GNATSAQGGQ
AAAPTPGEPV TGDRIILGTI GEPSNLLPFI ASDASSHEVS DQIFVAALRY DKDLNIEKWA
AASCEVLENG TLLRFTLRDD IRWEDGKPLT ADDVEFTYKL MVDPKTPTPY AEDYLAIQEF
RKTGPLSFEV RYAKPFARSL ITWMHGIMPK HLLEGQDLMN TPFSRKPVGA GPYRLKEWEA
GTRLTLEASP SYFLGRPYID EVVYRIIPDL STMFLELKAQ RLDMMNLSPQ QYLHQTNGAE
WDMAWRKFQY LSFGYSYLGY NLSLPMFRDV KVRQALTCAI DRKALVAGVL LGQGMPTVGP
YKPGTWVYND KIDDYPYDPA KARELLAQAG WVDTNGDGLL DKDGAPFAFT ILTNQGNDQR
IKAATIIQSQ LKSVGIDVKI RTVEWAAFIK EFVDKGRFDA VLLGWNILQD PDLYDVWHSS
KAVPGGLNFV GYKNPEVDDL LERARSTFDQ AERKKLYDRF QEILHRDQPY CFLYTPYSLP
IVSSRFQGLE PAPAGLTHNF TRWWTPREQQ RYRMQQ
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