Gene DvMF_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0781 
Symbol 
ID7172670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp938303 
End bp939085 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID643539283 
ProductNLP/P60 protein 
Protein accessionYP_002435206 
Protein GI218885885 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.110248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATGA CGACAAAACA CGGACCGTCG CCGCTGTTCC GCGCCTGCGC CCGCCTTTTG 
CCGCTACTGC TCGCCCTGGC TCTGGCCGGT CCCGCCTGTG TTCGCCAGCC TTCGCAGCCC
GGCCAGGCCG ACAGGATCGC GCAGAGCGCG GACCAGCCCG CCGCCACGGC AGCATCCCCC
ATCCCCAGCG ACGGGGCCGG GGCTTCCTGC GAAATCGCGT CCCGTTACGA GGCGTCGGCC
CATGCCGACG GCTCCGACTC CCGGTTTGCC GAGGAGGAGG AAGACGGCGA TGACACCCTT
GCCGACGGCG TACTCAGCGA CATTGCCGAA CTGGACGAAG CTCTGGCCGC CATGGATGAA
TCCGGCGACC ACCACCCCAA GACGGAAGAA GTCGACGACG ACATGAGCGC CATCGACTCC
CGCATGCGGC TGGTCAACGT GGCCATGTCC AAGCTGGGCA CCCGCTATCG CCGGGGTGGC
TCGGGCGAAA CCGGGTTCGA CTGCTCCGGC TTTACCGGCT GGGTGTACGA GAACATGGGC
GTGGATCTGC CGCGCACCTC GCAGTCGCAG TTTCTTGAAG GGCGCACCAT CCGCCGGGAA
CAGCTGCAAA CCGGCGACCT GGTGTTCTTC AAGCGCAACA AGAAGCGCCG CATCCACCAC
GTGGGCATCT ATCTGGAGGA CGGCAAGTTC ATCCACAGCA GCTCGTCCGA CGGCGTCGTC
ATCTCGAAGC TGGACGCCAA GCCGTGGTGC AACCAGTGGG CCGGGGCCAA GCGCGTGTTC
TAG
 
Protein sequence
MHMTTKHGPS PLFRACARLL PLLLALALAG PACVRQPSQP GQADRIAQSA DQPAATAASP 
IPSDGAGASC EIASRYEASA HADGSDSRFA EEEEDGDDTL ADGVLSDIAE LDEALAAMDE
SGDHHPKTEE VDDDMSAIDS RMRLVNVAMS KLGTRYRRGG SGETGFDCSG FTGWVYENMG
VDLPRTSQSQ FLEGRTIRRE QLQTGDLVFF KRNKKRRIHH VGIYLEDGKF IHSSSSDGVV
ISKLDAKPWC NQWAGAKRVF