Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0774 |
Symbol | |
ID | 7172662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 928063 |
End bp | 931155 |
Gene Length | 3093 bp |
Protein Length | 1030 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643539275 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_002435199 |
Protein GI | 218885878 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.142014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGG ATTTCATGGA TCCGGAAATA TTCGCCGATT TCATCGTCGA AGCCAAAGAG CACCTCGAGA CCATCGAGCC CAACCTGCTC GAACTCGAGA AGGCGCCGGA CAATCTCGCG CTGCTGAACG AGATATTCCG CCCCATGCAT TCGCTGAAGG GCGCGTCCGG CTTTCTGGGG CTGAACCGGA TCAACGGCCT TGCGCACCGT GCCGAAAACA TCATGGACGA GTTGCGCAAG GGGGACATGA CCGTCACCTC CGAGATCATG GACGTCATTC TCTCGGCCAC CGACGCGCTG CGCCAGATGG TGGACAACCT TGATACCACC GGCGGAGAGG GCGATGTGGA GACGGAATCC ATCATCGCCA CCATCGACGC CATCATGGCC GGCGGTGCTC CGCCAGCGGC CCCGCGTCCC GCGCCCGCCG CGCCCGCACC CGCGCCCGCT CCTGAACCCG CTCCGGCGGC TGAACCCGTT GTCGCTCCGG CTCCCGCGCC TGCCCCGGCA CCCGCTGCCG AGCCAGAGCC GGTGGCAGCG GCACCCCGCC CCCAGGCAGA GCGCGAAGTC CCGGCAGATG CCGGATCCGC CGAGTGGATC GCCACGCTGG AGCCCCTGGA GTCCTATGCC CTCACCGCCT TCGGCGAAGG GCACCTAAAG GACTTCATCG ACGAGGCCCG CGAGATGGCG GAAAATCTCA GTTCGGGGCT GCTGGAACTG GAACGCAACC CCACCGAGCA GGGAGAACTG GTCAACGACC TGTTCCGCTT CTTCCACAAC CTCAAGGGCA ACAGCGGCAT TATTGGTTTT GCCGAACTGA ACAGCCTGAC CCACGAGGCG GAAACCCTGC TCAACAACGT GCGCCGGGGC GAAATGACCG GCTCGCATGA ACTGGTGGAC CTGCTGCTGC TGGTGGTGGA CCTGCTGGAA GCGCTTGTGA CGCGCATAGA CCCCGTGTCC GGCAACGTCA CCCCGTTCGA TATTTCGGTC ATTCTCGAAT GCCTGCGCAA GGCCGTGGCC GGTGGCGACA TCACCCTGCC CGAAGGCCTC GGCGGTCGCC GCAGCGGTGG ATCCGTGGCG GAAGCCCCCG CGCCGGAAGC CGGCGCGCCC GGCACGGATG ACGACGCTGA CGCGCCGTCC CCGCCCGTGG CCCCCGGTTA CGACCCCGAC GACGTGGCCC TGTTCATCAA TACGGTACGC CAGCAGATGG ACAACGTGGG CGTGGCCCTG AAGACCCTGG CCGTGGACGG CACCCAACGC GAGTATGTTG ACGCGCTGTA CCGGTGTCTG GTGACCATCC AGAATTCTTC CGGCTACATG GGGTTGGACG ATATTCGTGT CTACGCCGAG CGCACCGCGG GCCTGGTGGA CCAGGCGCGT TTTTCGGGCA TGGATTTCAG CCTGATGGTG GACCTGATGG AGCAGGAAAC CTCCATCATC GGAGACATGC TGGAAAAGCA GATCGCCCGC ATCAGCATGC CCGCGCCCGC CCAGGCCCCC GAAGCAGCCC CGGCTGCCCC CGAAGCCAAG GCGGCCCCCG CTCCGGCGGC AGAGGCCAAG GCCGTTGCGG CCCCGCCCGC TGCCAAGACT GACGTCACGA CTGACGCCAG GGCAGCTGCC TCGGTTGATG CCGAAGACGA GGACGCGGAG GACGACGACG CGGCGGTGGT CACCATTTCC TCGGTGACCG GAACCCCCGC GCCCGCAGCG GCGGTGAAGC CAGCCGCCCC GGCCCCTGCG TCCGCCGTGG CCGCCCCTGC CGCTTCGGCC AAGCCTGCGG CACCGGTTGC TCCTGCCAGG CCCGCCGCTC CGACGGCGCC GTCCGCACCT GCGGCCCCTG CGGGCGGTCA GGGCGCGGCA GCCGCCGCGC AGGCCCAGCA GGCCGGAGCA GCCAAGGCCT CGTCCACCAT CCGCGTGGAC CACGAAAAGC TGGACCACCT GATGAACCTC ATCGGCGAAC TGATCATCAA CCGCAACCGC TACACCATGC TGGCCCGCAG GCTGGAGGAC GACACCAACG TCGTCATCGC CGAAGTGGCC CAGGACCTGT CCGAAACCAC CTACGCCATG GCGCGCATTT CGGACGACCT GCAAGACACC ATCATGAAGG TGCGCATGGT GCCGGTGTCC TCGGTGTTCT CGCGTTTCCC GCGCCTGGTG CGCGACCTGT CGCGCAAGAG CGGCAAGGAA GTGGACCTGA TCCTGGAAGG CGAGGAAACG GAACTGGACA AGAGCGTCGT GGAAGTCATC GGCGACCCGC TTGTGCACCT CATCCGCAAT GCCGTGGACC ACGGCGTGGA GTCCGAGGAC GAGCGCGTGG CCAAGGGCAA GAAGGCCAAG GGCAAGGTGA CCCTGCGCGC CTATCACAAG GGCAACTCCG TCGCCATCGA GATCGAGGAC GACGGCAAGG GCATCGACCC GGAAAAGATG CGCGAAGTGG CCGTGCGCAA GGGCATCATC ACCCCCGACG AAGCCAAGGC CATGGACGAC CGCGAAGCCA TGGAACTCAT CTTCGCCCCC GGGTTCTCCT CGGCAGAGAA GATCACCGAC ATCTCCGGGC GCGGCGTGGG CATGGACGTG GTGCGCACCA ACATCAAGAA CCTGAAGGGC AGCGTCAGCA TCCATTCGGA AATCGGCAAG GGCACCCGCT TCACCCTGTC CCTGCCGCTG ACACTGGCCA TCATTGATGC GCTGATGGTC AACGTGGCGG GCGAGATGTA CGCCATCCCG CTGGACGCCG TGTCCGAAAC CACCAAGATC GAGGCGCGCC GCCTTACCGA CGTCAAGGGC CGCAAAGCCG TGACCCTGCG CGGCGAAGTG CTGGGCATCG CCTCGCTGTC CGAACTGCTG GGCCTGCCCA AGGGCGACAA GCAGGACGTG CTGTCCGTCG TCGTCATCCA CGACAACGAC CGGCGTCTGG GCCTGGTGGT GGACCGCCTG CTGGAACGGC AGGAAATCGT CATCAAGCCC CTGGGCGCCT ACCTTGGCGA CCTCAAGGGC ATCTCCGGCG CGACCATCAT GGGCGACGGC AGCGTCATCC TGATCCTGGA TCCGCACGAA GTGTACATGA TGGCCACTTC AAAGGCCATT TAA
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Protein sequence | MSQDFMDPEI FADFIVEAKE HLETIEPNLL ELEKAPDNLA LLNEIFRPMH SLKGASGFLG LNRINGLAHR AENIMDELRK GDMTVTSEIM DVILSATDAL RQMVDNLDTT GGEGDVETES IIATIDAIMA GGAPPAAPRP APAAPAPAPA PEPAPAAEPV VAPAPAPAPA PAAEPEPVAA APRPQAEREV PADAGSAEWI ATLEPLESYA LTAFGEGHLK DFIDEAREMA ENLSSGLLEL ERNPTEQGEL VNDLFRFFHN LKGNSGIIGF AELNSLTHEA ETLLNNVRRG EMTGSHELVD LLLLVVDLLE ALVTRIDPVS GNVTPFDISV ILECLRKAVA GGDITLPEGL GGRRSGGSVA EAPAPEAGAP GTDDDADAPS PPVAPGYDPD DVALFINTVR QQMDNVGVAL KTLAVDGTQR EYVDALYRCL VTIQNSSGYM GLDDIRVYAE RTAGLVDQAR FSGMDFSLMV DLMEQETSII GDMLEKQIAR ISMPAPAQAP EAAPAAPEAK AAPAPAAEAK AVAAPPAAKT DVTTDARAAA SVDAEDEDAE DDDAAVVTIS SVTGTPAPAA AVKPAAPAPA SAVAAPAASA KPAAPVAPAR PAAPTAPSAP AAPAGGQGAA AAAQAQQAGA AKASSTIRVD HEKLDHLMNL IGELIINRNR YTMLARRLED DTNVVIAEVA QDLSETTYAM ARISDDLQDT IMKVRMVPVS SVFSRFPRLV RDLSRKSGKE VDLILEGEET ELDKSVVEVI GDPLVHLIRN AVDHGVESED ERVAKGKKAK GKVTLRAYHK GNSVAIEIED DGKGIDPEKM REVAVRKGII TPDEAKAMDD REAMELIFAP GFSSAEKITD ISGRGVGMDV VRTNIKNLKG SVSIHSEIGK GTRFTLSLPL TLAIIDALMV NVAGEMYAIP LDAVSETTKI EARRLTDVKG RKAVTLRGEV LGIASLSELL GLPKGDKQDV LSVVVIHDND RRLGLVVDRL LERQEIVIKP LGAYLGDLKG ISGATIMGDG SVILILDPHE VYMMATSKAI
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