| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0578 |
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| Symbol | gatB |
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| ID | 7172465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 685398 |
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| End bp | 686828 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643539078 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_002435003 |
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| Protein GI | 218885682 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.29374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGT ATGAAGCCGT CATCGGGTTG GAAGTGCACG CCCAGTTGCG CACGCGGTCC
AAGCTGTTCT GTTCCTGCTC CACCGCGTTC GGGTCGGCCC CCAACACCAA CGTGTGCGAG
GTGTGCTCCG GCATGCCCGG CGTGCTGCCG GTGCCCAACG CCCGCGCCGT GGAATACGCC
GCGCGCATGG GCATGGCCGT GAACTGCACG GTGAACCCCG TCTCGGTGTT CGCCCGCAAG
AACTATTTCT ACCCGGACCT GCCCAAGGGG TACCAGATTT CGCAGTTCGA AACACCCATC
TGCGAGCATG GCCACCTGAA TATCTCCGTG AACGGCCAGA CGCGCCGCAT CGGCATCACG
CGCATCCACA TGGAGGACGA CGCGGGCAAG AACATCCACT CGGCGGGCGA CAACGCCAGC
TACGTGGACC TGAACCGCTC GGGCGTGCCG CTCATCGAGA TCGTCAGCGA GCCGGACATG
CGCAGCGCCG AGGAGGCCGT GGCCTACCTG AAGGCCCTGC ATGCCATCGT GGTGTACCTG
GGCATCTGCG ACGGCAACAT GGAGGAAGGC AGCTTCCGCT GTGACGCCAA CGTGTCCATC
CGCCCCAAGG GGCAGCAGGA ATTCGGCACC CGCGCGGAAC TGAAGAACCT GAACTCGTTC
CGCAACGTGC AGCGGGCCAT CGAGTACGAA ATCGCCCGCC AGCAGGACGT GCTTGAGGAT
GGCGACGCCG TGGTGCAGGA AACCCGCCTG TACGACGCGG TGAAGAACGT CACCGTGTCC
ATGCGCGGCA AGGAAGAAGC CCACGACTAC CGCTACTTCC CCGACCCGGA CCTGATGCCC
GTGCGCATCG CGGAAGACGA TCTGGTCCGC TGGCGCGCCG ACCTGCCGGA ACTGCCGCAG
GCGCGTGTGG CGCGTTTCAT GTCTGCGTAC GACCTGTCGG AGCAGGACGC CGACGTGCTG
ACCGCCGACC GGGCGCTGGC CGACTTCTTC GAGGCGGCCA CGGCGGCCTG CGGCCAGCCC
AAGAAGGTGG CCAACCTGAT GCAGGGCGCG CTGCTGCGCG AACTGAACCA GCGCGCGGTG
ACCGTGGACG CCATCGCCAT GCGGCCCGAG GCGCTGGGCG AACTGGTGCG CATCATCGAG
GCCGGGCTGA TCAGCGCCAA GATCGCCAAC GACATCTTTG GCGAACTGGT GGAAACCGGC
GCCATGCCCG AAGCCTTCGT GAAGGAGCGC GGGCTGGTGC AGATTTCCGA CACCTCGGCC
ATCGAAACCG CCGTGGACGA GGCCATTGCC GAAAACCCGG CGGAAGTGGA AGCCTACAAG
GGCGGCAAGA CCAAGCTGAT CAGCTTCTTC ATGGGGCAGA TCATGCGCAA GACCAAGGGC
AAGGCCAACC CGGCACTGGT TACGGAACTG CTGCAGAAGA AGCTGGGATA G
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| Protein sequence | MALYEAVIGL EVHAQLRTRS KLFCSCSTAF GSAPNTNVCE VCSGMPGVLP VPNARAVEYA
ARMGMAVNCT VNPVSVFARK NYFYPDLPKG YQISQFETPI CEHGHLNISV NGQTRRIGIT
RIHMEDDAGK NIHSAGDNAS YVDLNRSGVP LIEIVSEPDM RSAEEAVAYL KALHAIVVYL
GICDGNMEEG SFRCDANVSI RPKGQQEFGT RAELKNLNSF RNVQRAIEYE IARQQDVLED
GDAVVQETRL YDAVKNVTVS MRGKEEAHDY RYFPDPDLMP VRIAEDDLVR WRADLPELPQ
ARVARFMSAY DLSEQDADVL TADRALADFF EAATAACGQP KKVANLMQGA LLRELNQRAV
TVDAIAMRPE ALGELVRIIE AGLISAKIAN DIFGELVETG AMPEAFVKER GLVQISDTSA
IETAVDEAIA ENPAEVEAYK GGKTKLISFF MGQIMRKTKG KANPALVTEL LQKKLG
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