Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0562 |
Symbol | |
ID | 7172449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 661492 |
End bp | 662370 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643539062 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_002434987 |
Protein GI | 218885666 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.00078537 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGTTTC AAGGCGCTTT CACCGCTCTC GTCACGCCGT TCCGCAACGG CGAGGTGGAC GAGGAACGCT ACCGCGCGCT GGTCGAATGG CAGATCGAAC AGGGCATCAA CGGCCTTGTC CCCTGCGGCA CCACCGGCGA ATCGGCAACG CTCACCCACC AGGAACACAA GGACGTCATC CGCATCTGCG TCGAGCAGGT CAAGGGCCGC GTGCCCGTGC TGGCGGGCGC CGGTTCCAAC AACACCCGCG AGGCGGTGGA GCTTACCCGC TACGCCAAGC AGGCCGGGGC CGACGGCGCG CTGCTGATCA CCCCGTACTA CAACAAGCCC ACCCAGGAAG GGCTGTACCA GCACTTCAAG GCCATTGCCG CCGAAGTGCC CATGCCCTTC ATCGTGTACA ACGTGCCCAG CCGCACCGGC ACCAACCTGT GTCCGGAAAC CCTGGCCCGC ATGAAGCGCG ACATCCCCGA GGTGATCGGG GTCAAGGAAG CCACCGGCAA CCTGATCCAG GTCTCTGAGA TCATCGAATA CTGCGGCGCC GACTTCCAGG TGCTGTCGGG CGACGACTTC ACCGTGCTGC CCCTGCTGGC CGTGGGCGGC TGCGGGGTCA TCTCGGTGAG CTCCAACGTG GTGCCCGCCA AGATGTCCGA GCTGTGCCGC GCCTTCTTCG AGGGCGACCT GGCCACCGCG CGCCGGGTGC ATTACGAGAT CGCGTCCATC AACCGCGCCA TGTTCCTTGA AACCAACCCC ATCCCGGTCA AGACGGCCCT GTCCATGATG GGCAGGATCG AACTGGAACT GCGCCTGCCC ATGGTGCCGT TGCAGCCCGC CAACCAGTCG CGCCTGCGCG ACATCCTGTC GGCGGCGGGC ATCGTCTAG
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Protein sequence | MQFQGAFTAL VTPFRNGEVD EERYRALVEW QIEQGINGLV PCGTTGESAT LTHQEHKDVI RICVEQVKGR VPVLAGAGSN NTREAVELTR YAKQAGADGA LLITPYYNKP TQEGLYQHFK AIAAEVPMPF IVYNVPSRTG TNLCPETLAR MKRDIPEVIG VKEATGNLIQ VSEIIEYCGA DFQVLSGDDF TVLPLLAVGG CGVISVSSNV VPAKMSELCR AFFEGDLATA RRVHYEIASI NRAMFLETNP IPVKTALSMM GRIELELRLP MVPLQPANQS RLRDILSAAG IV
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