| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0509 |
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| Symbol | |
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| ID | 7172396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 599259 |
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| End bp | 600755 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643539009 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002434934 |
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| Protein GI | 218885613 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.00480754 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAGA CACCGCAACA CACCATGTGG ACCATGGGCC TTTCCGAGGC CGATGCGGGG
TTGCTGGCCG CCCACGCGGG CAGCGACTAC CGCATCATCG CCCTGCCTCC GGGGCGCGCG
CCGTCCGCCC TTGAAATGGA ACGTGACGAC CCGTGCCTGT TCTGGCTCAC GTCCGCCGCA
TGGACCGCCA TCGCCAGCCA GCGCGAAGGC AAGTCGCAGC ATCTCGACCT TGTCCCGCGC
GTGCTGGTGC TGGAACCCGG CTACTCGCGC GAGGAAATAG AACGGGCGCT GGACAGCAGC
TTCACCGATG TCATCAAGCC GCCGCTCACA CGCGCCCGCG TGCTGGACGT GCTGCGCCGC
GCGGTGGAAA CGCGCAACCT GTACCACGAC ATCCTGCGCA TGACGCGCGA AATCTTTCTT
GAACGCGAAA TGCTGGCCCG CAAGAACGAC ACCCTGTCGT TCCTGGTGAC CTTTCTGACA
CGGGCCACCG AAAGCCTGGA CCCTGCGGAA ATCCTGGGCA AGGTGCGCGA AGACCTTGCG
CTGCTGCTGC CGGTGACGGC GGTACACGGC ATCTTCTGGC CTCCGGTGCC CGAAGGAGGC
GCGCTGGAGG CGGAACTGTT CGTGGCCACC GCACCCGACT GCCCGGTGAA CGTGCAGTGG
GTGGACCTGT TGCTGGAATC GGCCCGGCGC CTGGGCAACG CACCGGTGGC GGGCTATCGC
GTCAACCATG TGCCCGGCAT GGCCGAACTG CTCGACGCCA CCGGCTGCTC CGTGGACCCC
GGGCTGCCCC CCGTGCCTGG CCGGGTGATC CTGATGCCGT TGCGCACCGG CGCCGAAGCC
ATGGGGGCGC TGGCCATCCT GACCGACGGC ACCCAGACCA TGGGCAAGGA CCAGGCACAG
GCGCTGGATT CGGCCATGAA GCACCTTGCC CTGGCGCTGA AGAACGCCAT GGTCTACCGC
GAGGTGAAGT TGCAGGCCGA CCACGACGCC CTGACCCGGC TGCACAACCG CCGCAGCCTC
GACGAGCGCC TGCGCACAGA ATTCGAACGG CACCGCCGCT ACGGCCACTC CATGACCCTG
CTGCTGCTGG ACCTGGACCA CTTCAAGGCC ATCAACGATA CTTACGGCCA TCTCGCGGGC
GATGCGGTGC TGCGCGAACT GGCCGACGTG CTGCGCCATT CCATCCGCAC CACGGATTTC
GCGGCCCGCT ACGGCGGCGA GGAATTCGTG GTCATCCTGC CACATACGGA AGAAGCGCAG
GGCCACATGC TGGCCGAACG GCTGCGCCAC CGCATCGAGC AGTGCCGGGT GCAGCACCAC
GGGGTGCAGC TTTCGGCCAC GGTGAGCATC GGCGTGGCGG GCTTTAGCCC CGGAGCCTTC
GCCAACGTGG AGGAACTGGT GCGCGAGGCC GACCGGGCGC TGTACCTGGC CAAGGCCAAT
GGCCGCAACG TGGTGTGCAC CATGTCCGGC TGCGAAGACG CCAAGGCCGC CGGGTAG
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| Protein sequence | MKKTPQHTMW TMGLSEADAG LLAAHAGSDY RIIALPPGRA PSALEMERDD PCLFWLTSAA
WTAIASQREG KSQHLDLVPR VLVLEPGYSR EEIERALDSS FTDVIKPPLT RARVLDVLRR
AVETRNLYHD ILRMTREIFL EREMLARKND TLSFLVTFLT RATESLDPAE ILGKVREDLA
LLLPVTAVHG IFWPPVPEGG ALEAELFVAT APDCPVNVQW VDLLLESARR LGNAPVAGYR
VNHVPGMAEL LDATGCSVDP GLPPVPGRVI LMPLRTGAEA MGALAILTDG TQTMGKDQAQ
ALDSAMKHLA LALKNAMVYR EVKLQADHDA LTRLHNRRSL DERLRTEFER HRRYGHSMTL
LLLDLDHFKA INDTYGHLAG DAVLRELADV LRHSIRTTDF AARYGGEEFV VILPHTEEAQ
GHMLAERLRH RIEQCRVQHH GVQLSATVSI GVAGFSPGAF ANVEELVREA DRALYLAKAN
GRNVVCTMSG CEDAKAAG
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