Gene DvMF_0485 details

Gene Information

• Locus tag: DvMF_0485
• ID: 7172371
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 569723
• End bp: 570280
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643538984
• Product: ATP-dependent protease peptidase subunit
• Protein accession: YP_002434910
• Protein GI: 218885589
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 56
• Fosmid unclonability p-value: 0.00182784
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGAACTGA AGGGAACCAC CATCCTTGCC GTGCGCGACG CGGACGGCGT GGCCATGGCC 
GGTGACGGCC AGGTGACCAT GGGCCAGAGC GTGGTCATGA AGCACACCGC CCGCAAGGTG 
CGCCGCCTGT ACCGCGACCG GGTGCTGGCG GGCTTTGCCG GGGCCACGGC AGACGCGTTC 
ACCCTGTTCG AGCGCTTCGA GGCCAAGCTG GAGGAATTCG GCGGCAACCT TACCCGCGCC 
GCCGTCGAAC TGGCCAAGGA CTGGCGCAAG GACAAGTACC TGCGCAGGCT GGAGGCGATG 
CTGCTGGTGG CCGACGCGGA AACCATCCTC ATCCTGACCG GCACCGGCGA CGTCATCGAG 
CCGGACGACG GCATTGCCGC CATCGGCAGC GGCGGCCCCT ATGCGCTGTC CGCCGCACGC 
GCCCTGTCGC GGCACACCAC GCTGGACGCG GAAACCGTGG TCCGCGAGGC CATGGCCGTG 
GCCGGAGAAC TGTGCGTGTT CACCAACGGG CACCTGACCG TGGAAACGCT GCGCCGCAAC 
GGGGGCGCCA CCACGTGA 

 

Protein sequence

MELKGTTILA VRDADGVAMA GDGQVTMGQS VVMKHTARKV RRLYRDRVLA GFAGATADAF 
TLFERFEAKL EEFGGNLTRA AVELAKDWRK DKYLRRLEAM LLVADAETIL ILTGTGDVIE 
PDDGIAAIGS GGPYALSAAR ALSRHTTLDA ETVVREAMAV AGELCVFTNG HLTVETLRRN 
GGATT