Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0483 |
Symbol | |
ID | 7172369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 567426 |
End bp | 568898 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643538982 |
Product | peptidase M48 Ste24p |
Protein accession | YP_002434908 |
Protein GI | 218885587 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.00260218 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCACC GCATGACCAA CGATTTCCGC CATTCTTCCG CGCCCCGCAC CGGCAGGCTT CGTGCCCGCC TGCGGGGCGC GCTTGCCCTG TGCCTGTGCG GGCTCATGCT GCTGGGCCAG GCCCTGCCTG CCTTTGCGCC GCCCGCCGGG GCCTTCCTGG GCGACTTCAC CGTCAAGGAC GAGGTGGAGC TGGGCAAGAA GTTCAACGTG CTCATCAAGG CCCGCCTGCC GCTGGTGGAA GACCCGGAGG TGAAGGAGTA CGTGCGGTCC ATCGTCGAAC GGCTGAAGGC GGTGGTGCCG CCGCAGCCCT TCGAGTTCGA GACCAACGTG CTGCTCCACA ACGCGGTCAA CGCCTTTGCC AGCCCCGGCG GCTACATCTT CGTGCACACC GGCCTGCTGA TGGCCATGGA GCATGAAAGC GAGGTGGCGG GCGTGCTGGC CCACGAAATG GCCCACGTCA CCCAGCGCCA CATCGCCAGC CGCATCGAAA AGTCGCAGCG CATCACCCTG CTCAGCCTGG CCGGGGCGCT GGCCGGTGCC TTCGTGGGGG GGGGCGGCAG CAGCAAGGGC GCGGCCATGG CCGGGTCGCT GGCGGCGGGG CAGACGGCCA TGCTCAACTA CAGCCGCATC GACGAATCGG ATGCGGACCA GGCGGGCATG CAATATCTGG TGGCCGCGGG ATTCCGGCCC GACGGCATGG CCGGGGCCTT TGAAAAGCTG CGCAGGCAGA GTTGGTCCAC CGGCACGGAC GTGCCCGCCT ATCTCAGCAC CCACCCCAAC ATCACAGAGC GCATCAGCGA AGTGCGCCTG CGCGTGGAAC AGCTGGCCGC CAGCGTGCGC AACCGGCAGG ACGACGACGA ACGATTTCGC CGGGTGCAGC TGCTGGTGCG CGCCCGCTAT GCGGACGCCA CCACCGCCCT GCGCACCTTC GAACAGGCCA AGCCCACCGA CTGCATGTCC CAGTTGGGGC TGGCCATCCT GTATTCGCGC CTGAACCGGA TCGGCGAGGC CACGACGGCC TTCGACCGGG CACTGGCCTG CAACCCCAAG GACCAGCTTG TCTGGCGCGA GGCCGGGCGG TTCCACTACA CCAAGGGTGA TCGCAACCGC GCCGCGCAGA TGCTGCAACG CGCCGTGCTG ATGAATTCGC GCGACTACAT GGCCCTGTTT TTCTACGCGC GGCTGCTGTT CGATGCCGGT CAGCGCAACG AGGCCTACAC CTACTACAAG GAAGTGCTGC GCCACCTGCC CGAGGATTCC GAAGTGCACG ACTACTACGG ACGCGCCCTG GGCATGGACG GACAGGTCTT CAAGGGCTAC CTGCACCTTG CCTACAGCGC GCTGTATTCC AACGAGAAGG AAAAGGTGGA ACAGCTGCGC GACAAGGCGC GGGCGGTCAT CCGCACGCCG GAGGACCAGA CGGACCTGGA ACGCTTCGAC ACCCGGTATC AGGAGCGCAA GGCGGTCTGG TAG
|
Protein sequence | MTHRMTNDFR HSSAPRTGRL RARLRGALAL CLCGLMLLGQ ALPAFAPPAG AFLGDFTVKD EVELGKKFNV LIKARLPLVE DPEVKEYVRS IVERLKAVVP PQPFEFETNV LLHNAVNAFA SPGGYIFVHT GLLMAMEHES EVAGVLAHEM AHVTQRHIAS RIEKSQRITL LSLAGALAGA FVGGGGSSKG AAMAGSLAAG QTAMLNYSRI DESDADQAGM QYLVAAGFRP DGMAGAFEKL RRQSWSTGTD VPAYLSTHPN ITERISEVRL RVEQLAASVR NRQDDDERFR RVQLLVRARY ADATTALRTF EQAKPTDCMS QLGLAILYSR LNRIGEATTA FDRALACNPK DQLVWREAGR FHYTKGDRNR AAQMLQRAVL MNSRDYMALF FYARLLFDAG QRNEAYTYYK EVLRHLPEDS EVHDYYGRAL GMDGQVFKGY LHLAYSALYS NEKEKVEQLR DKARAVIRTP EDQTDLERFD TRYQERKAVW
|
| |