| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0454 |
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| Symbol | |
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| ID | 7172340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 532901 |
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| End bp | 534943 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538953 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_002434879 |
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| Protein GI | 218885558 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 0.77141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CCCCGTTCAT TCTGCGCACC GACTACGAAC CGCGCGGCGA CCAGCCGGAA
GCCATCGGCC AGATCGTCTC CAACATCGAG GCGGGCGTGA CGGACCAGGT GCTGCTGGGC
GTCACCGGTT CCGGCAAGAC CTTCACCATG GCCCAGGTCA TCGCCCGGTG CGGCAGGCCC
GCCCTGGTGC TGGCCCCCAA CAAGACCCTG GCCGCCCAGT TGTACAACGA GTTCCGCCAG
CTGTTCCCCG AGAACGCGGT GGAATATTTC GTCAGCTATT ACGATTACTA CCAGCCTGAA
GCCTACGTGC CGTCGTCGGA CACCTACATC GAGAAGGATT CGTCCATCAA CGACAACATC
GACAAGCTGC GCCACGCGGC CACCCATGCG CTGCTCACCC GGCGCGACGT GGTCATCGTG
GCCTCGGTGT CGTGCATCTA CGGCCTGGGT TCGCCGGAAT ACTACGCCAA GCTGGTCATC
CCCGTGGAGA CCGGGCAGCG GCTGTCCATG GATGCGCTGA TCACCCGGCT GGTGGAAGTG
CAGTACGAGC GCAACGACTA CGACTTCCAT CGCGGCACCT TCCGGGTGCG CGGCGACGTG
CTGGAAATCA TTCCTGCCTA CCATCACGAA CGGGCGCTGC GCATCGAGTT CTTCGGCGAC
GACATCGACG CCATCAGCGA GATCGATCCG CTCACCGGGC AGGTGCTGGC ATCCGTGGGC
AAGACGGTCA TCTACCCCGC CAGCCACTAC GTGTCCGACC GCGACAACCT GGTGCGCGCC
ATTTCCGACA TCCGCGACGA ACTGGGCGAA CGCCTGCGCG AGCTGAAGGG CGGCAACCGC
CTGGTGGAGG CGCAGCGGCT GGAACAGCGC ACCATGCTCG ACCTCGAGAT GATGGAGGAA
ATGGGCTACT GCAACGGGGT GGAAAACTAT TCGCGCCATC TGGATGGCCG CAAGGCGGGC
GACCCGCCCT CGTGCCTGCT GGACTACTTT CCCGACGACT TCCTGCTGTT CGTGGATGAA
TCGCACATCA CGGTCTCGCA GGTGGGGGCC ATGTACAAGG GCGACCGCTC GCGCAAGTCC
ACACTTGTGG ACTACGGGTT TCGCCTGCCC TCGGCGCTGG ATAACCGCCC GCTGGAATTC
CACGAATTCC TGGCCCGCCT GAACCAGGCC ATCTATGTGT CCGCAACGCC GGGCAAGTGG
GAGCTGGACC GCTCGCAGGG CATCGTGGCC GAACAGATCA TCCGGCCCAC CGGCCTCGTG
GACCCCATCA CGGAGGTGCG CCCGACAAAG GGGCAGGTCG ATGATCTTCT GGGCGAATGC
CGCCTGCGCG CCGCGCGCGA CGAGCGGGTG CTGGTGACCA CCCTGACCAA GCGCATGGCC
GAGGACCTGA CCGAATATTT CAACGAGATG GGCGTGGCCG CCCGCTACCT GCATTCCGAC
ATCGACACCA TGGAACGCAT GGCCATCATC CAGGCGTTGC GCCGCAAGGA ATTCGACGTG
CTGGTGGGCA TCAACCTGCT GCGTGAAGGT CTTGATATCC CGGAAGTTTC TCTGGTATCT
ATCCTTGATG CGGACAAGGA GGGCTTTCTG CGCTCCGCGG GTTCGCTCAT CCAGACCTTT
GGCCGCGCCG CGCGCAACGT CGAAGGCCGG GTGCTGATGT ACGCGGACGT GGTGACCCGC
TCCATGCAGG CCGCCATGGA CGAGACGGCG CGGCGGCGCG AACGGCAGAC CGGCTACAAC
GAGGCGCACC ACATCGTGCC CGCCACCATC CGCAAGGCGG TGGAAACCCC GTTCGACGCC
ATCTACGCCG AAGCCGCCGA GGCCAAGGGC CGCAAGGGCA AGGGGCGCAA GGGCGCGGCG
CAGGCGGCGG AAACCTTTGC CCCGTGGTCC AGCGACCCGC ACGAACTGGC CAAGCAGATC
CAGCAGCTGG AGCGCGACAT GCGCGAGGCC GCCAAGGAGC TGGAATTCGA GCGGGCGGCG
GAACTGCGCG ACCGCATCCG GCTGCTGCGC GAACATCTGC TGGGGGCAGG CGGCGCGGGG
TAG
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| Protein sequence | MTQSPFILRT DYEPRGDQPE AIGQIVSNIE AGVTDQVLLG VTGSGKTFTM AQVIARCGRP
ALVLAPNKTL AAQLYNEFRQ LFPENAVEYF VSYYDYYQPE AYVPSSDTYI EKDSSINDNI
DKLRHAATHA LLTRRDVVIV ASVSCIYGLG SPEYYAKLVI PVETGQRLSM DALITRLVEV
QYERNDYDFH RGTFRVRGDV LEIIPAYHHE RALRIEFFGD DIDAISEIDP LTGQVLASVG
KTVIYPASHY VSDRDNLVRA ISDIRDELGE RLRELKGGNR LVEAQRLEQR TMLDLEMMEE
MGYCNGVENY SRHLDGRKAG DPPSCLLDYF PDDFLLFVDE SHITVSQVGA MYKGDRSRKS
TLVDYGFRLP SALDNRPLEF HEFLARLNQA IYVSATPGKW ELDRSQGIVA EQIIRPTGLV
DPITEVRPTK GQVDDLLGEC RLRAARDERV LVTTLTKRMA EDLTEYFNEM GVAARYLHSD
IDTMERMAII QALRRKEFDV LVGINLLREG LDIPEVSLVS ILDADKEGFL RSAGSLIQTF
GRAARNVEGR VLMYADVVTR SMQAAMDETA RRRERQTGYN EAHHIVPATI RKAVETPFDA
IYAEAAEAKG RKGKGRKGAA QAAETFAPWS SDPHELAKQI QQLERDMREA AKELEFERAA
ELRDRIRLLR EHLLGAGGAG
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