Gene DvMF_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0440 
Symbol 
ID7172326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp516397 
End bp516984 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID643538939 
Productiojap-like protein 
Protein accessionYP_002434865 
Protein GI218885544 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.178504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TCGAAAAGAA GTTCAAGGAC ATCCCCACCG CCGAGAAGGT AGCCACCTTC 
GTGGGCTGGC TGGAAGAAAA GAAGGGCCGC GACGTGCTGG CCCTGGACCT TGCGGGCATG 
AACGCCTTTG CCGAATCCAT CATCATCGTC ACCGCCGGTT CCGTGCGCCA CGCGCAGGGC 
CTGGCCGACC ACGTGCTGGG CATGTGCGAC GACGAAAAGA TCGAATTCCT GCGCATGGAA 
GGCTATCAGG CCGGGCAGTG GATCCTGCTC GACTGCAACG ACGTGATCAT CAACGTCTTC 
CAGACCCCGG TGCGTGAAAT GTTCCGCCTG GAAAGCCTGT GGTCCGACGC GCTGGTGCTG 
CATGACGGGC GCGAGCTGGC CCCGCCGGTG GAGGCAGCCA CCACCTCTGC GGGCACCCAC 
AGCGGCGTGC GCCGCATGGC TGGCAAGGTG GCTGGCGCCC GCGCCGCCGC CGTCACCGCC 
AAGCGCGCGG CCACCTCGTC CGCCGATGCG GACGCCGAGG AACCCAAGCC CCGCGCGCGC 
ACCCGCAAGC CCGCCGCGCC CAAGGCCCCG GAAGGGGACG ACCAGTGA
 
Protein sequence
MKPIEKKFKD IPTAEKVATF VGWLEEKKGR DVLALDLAGM NAFAESIIIV TAGSVRHAQG 
LADHVLGMCD DEKIEFLRME GYQAGQWILL DCNDVIINVF QTPVREMFRL ESLWSDALVL 
HDGRELAPPV EAATTSAGTH SGVRRMAGKV AGARAAAVTA KRAATSSADA DAEEPKPRAR 
TRKPAAPKAP EGDDQ