| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0427 |
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| Symbol | |
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| ID | 7172313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 501115 |
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| End bp | 502548 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643538926 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_002434852 |
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| Protein GI | 218885531 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.00518389 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTGG AACTCAGGCA ACAGCTCAAG CTCACCCAGC AATTGGTGAT GACGCCGCAA
CTGCAACAGG CCATCCGGCT GTTGCAGCTT TCGCGGCTGG AGCTTGTCGA GACGGTGCAG
CAGGAAATGC TGGAAAACCC GTTTCTGGAG GAAGCCCAGG ACGAGGGGCC GCAGGTCGAG
ACTCCCGACC CGCGCGAAGC CGCCACCGCA GCTGCCGACG TAGCCTATGA CCGTGAAATC
GCCCGCGATG CCGACTGGGA AGATTACCTT GGCGACTTCG CCAGCACCAG CCGCCAGTCC
ACGGTGCGTG AAACGGAAAT GCCCGAGGAA ATGACCTCGT TCGAGGCGCG CTACGCCGCC
AAGCCCTCGC TGGAAGGGCA CCTGATGTGG CAGTTGCGCC TGTCCTCGCT GACCGAGCGC
CAGAAGGACA TTGGCGAGGT GATCATCGGC AACATCGCAT CGTCGGGCTA CCTGCACGCC
ACGGTGGACG ACATCGCCGA AATGGCGGGC GTGACCCCCG GCGAGGTGGA GTCCGTGCTG
CACGCCGTGC AGCGCTTCGA CCCCGTGGGG GTGTCCGCGC GCACGGCGCA GGAATGCCTG
CTGGTGCAGA TAGAGATGCT GGGCTACACG CGCGACAAGG TGCTGGTGGA ACTTGTGCGC
GACCACCTGG AAGACCTGGA GAAGCGCCGC TACAAGCCGC TGTTGCGCAA GTTTCGCCTT
ACCATGGAGG ACCTGAAGGA ATACCTGGAC CTCATCCAGA CCCTGGACCC CATGCCCGGC
GCCAGCTATG GCGGGGGCGA CCCGCAGTTC GTCAGCCCCG ACGTGTACGT CTACAAGTAC
GACGACGACT TCATCATCAT GCTCAACGAG GACGGGCTGC CGCACCTGCA ACTGAGCACC
ATGTACGAGC GGTCCGCCGC AGCGGCTGCA TCTGCGGGCG AACGCGAATA TTTCCAGGAA
AAGATGCGCT CCGCCTCGTG GCTCATCAAG AGCCTGTACC AGCGCCAGCG CACGCTGTAC
AAAGTGGTGG AATCCATCGT TAAGTACCAG CGCGGCTTTT TCGAGGACGG CGTTTCGCGC
CTGAAGCCGC TTATCCTGAA GGACATAGCC GACGACATCG GCATGCACGA ATCCACCGTC
AGCCGCATCA CCACCAGCAA GTACGTGGCC ACGCCCCACG GCATCATGGA GTTGAAGTTC
TTCTTCAACA GCGCGCTGGA GCTCGACGAC GGCAGCCAGG TGGGTTCCGA GAGCGTCAAG
GCGCTGATCA AGAAGCTGAT TGCCGACGAA GACCCTCGCG AGCCGCTGAG CGACGAGCGC
ATCGGTGAAA TTCTGAAGGA TCAGCTCAAA GTCAATATTG CCCGCAGGAC CGTTGCGAAG
TATCGTACTG CCATGGACAT TCCCTCCTCT TCCAAGCGGA AGGAACTGTT CTGA
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| Protein sequence | MALELRQQLK LTQQLVMTPQ LQQAIRLLQL SRLELVETVQ QEMLENPFLE EAQDEGPQVE
TPDPREAATA AADVAYDREI ARDADWEDYL GDFASTSRQS TVRETEMPEE MTSFEARYAA
KPSLEGHLMW QLRLSSLTER QKDIGEVIIG NIASSGYLHA TVDDIAEMAG VTPGEVESVL
HAVQRFDPVG VSARTAQECL LVQIEMLGYT RDKVLVELVR DHLEDLEKRR YKPLLRKFRL
TMEDLKEYLD LIQTLDPMPG ASYGGGDPQF VSPDVYVYKY DDDFIIMLNE DGLPHLQLST
MYERSAAAAA SAGEREYFQE KMRSASWLIK SLYQRQRTLY KVVESIVKYQ RGFFEDGVSR
LKPLILKDIA DDIGMHESTV SRITTSKYVA TPHGIMELKF FFNSALELDD GSQVGSESVK
ALIKKLIADE DPREPLSDER IGEILKDQLK VNIARRTVAK YRTAMDIPSS SKRKELF
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