| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0426 |
|---|
| Symbol | |
|---|
| ID | 7172312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 500448 |
|---|
| End bp | 500993 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643538925 |
|---|
| Product | sigma 54 modulation protein/ribosomal protein S30EA |
|---|
| Protein accession | YP_002434851 |
|---|
| Protein GI | 218885530 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.0105033 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG CCTTCACCTT CAAGAACTTC GAACCCTCCG ACCACCTGAA GAAGTACGCC
CGCCGCCGTC TTGAAAAGCT TGGCCGGTTC GTCGGCAAGT CCGCCCTGGA AATGCAGGTG
AACCTTTCCG TCGACAAGTT CCGCCACAAG GCGGAAGTGC AGATGGCCGG CGACGGTTTT
ACCTTCTCCG CCGTCGAACA GTCCGAAGAC ATGTACGCCA CCATCGACCT GGTGCTTGAA
AAGCTGGAAT CGCAGCTGCG CAAGCAGGTC GAAAAGCTGA AGGATCGCCG CCGTTCCGTG
CAGTCCGACA AGCTGGGCAA GGGCATCGAC GTGTTTACCT TCGGCACCGT GGGCGAAGGC
GAGGAACGGA CCATCACCGG CACCGACCAC TTCGCCCCCA AGCCCATGCA CGTGGACGAA
GCGGCCATGC AGCTCGACCA GGGCGACAAC GAGTTCCTGG TGTTCCTGAA CGCCGAGGTG
GAACGCGTCA ACATCATCTA CCGGCGTCGC AACGGCGATT TCGGCCTTAT CGATCCGGTC
GTCTAG
|
|---|
| Protein sequence | MNIAFTFKNF EPSDHLKKYA RRRLEKLGRF VGKSALEMQV NLSVDKFRHK AEVQMAGDGF
TFSAVEQSED MYATIDLVLE KLESQLRKQV EKLKDRRRSV QSDKLGKGID VFTFGTVGEG
EERTITGTDH FAPKPMHVDE AAMQLDQGDN EFLVFLNAEV ERVNIIYRRR NGDFGLIDPV
V
|
|---|
| |