| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0398 |
|---|
| Symbol | |
|---|
| ID | 7172284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 469064 |
|---|
| End bp | 469867 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643538897 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002434823 |
|---|
| Protein GI | 218885502 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.110488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CAGCTGCCAC CACCCGCGCC ACTTCCGCCC CATCTACCTC ACGCGGGGGC
ATCGTCTGCA TCACCGGGGC CACCGCCGGG TTCGGCGCGG CCACTGCCCG CCGCTTCGCC
GCCGAAGGCT GGCGCATCAT CGCCACCGGG CGTCGCCAGG ACCGGCTGGA TGCGCTGGTC
ACGGAACTGG GCGACGGCAA CTGCCTGCCG CTGTGCTTCG ACGTGCGCGA CGGCGATGCG
GTGCAGGCCG CGCTTGGGAA CCTGCCCGAG GCGTGGCGCG CCGTGGACGT GCTGGTGAAC
AACGCGGGCC TGGCGCTGGG GCTGGAACCC GCCCACCGTT GCAGCATGGA CGACTGGATG
ACCATGGTGG ACACCAACAT CAAGGGGCTG CTGCACGTCA CTCGCGCCCT GCTGCCCGGC
ATGGTGGAGC GGGGGCGCGG CCACGTGGTC AACCTGGGGT CCATCACCGG CACCTATGCC
TACCCCGGCG CCAACGTGTA TGGTGGCACC AAGGCCTTCG TGATGCAGTT TTCGCGCGGC
CTGCGGGCAG ACCTGCACGG CACCGGCGTG CGGGTGACCA ACATCGAGCC GGGGCTTGCG
GAAAGCGAGT TTTCCGTGGT GCGCTTCGGC GGTGATGCCG ACCGCGTCGC CAAACTGTAT
GAAGGCGCAT CCGCCCTGCG CCCGGAAGAC ATTGCCGACA CCATCGCCTG GGCCGTGTCC
TGTCCTGCGC ACGTCAACGT GAACCGCATC GAGGTCATGC CCACCAGCCA GTCCTTCGGC
GCGCTGCCCG TTCACCGCGC CTGA
|
|---|
| Protein sequence | MTATAATTRA TSAPSTSRGG IVCITGATAG FGAATARRFA AEGWRIIATG RRQDRLDALV
TELGDGNCLP LCFDVRDGDA VQAALGNLPE AWRAVDVLVN NAGLALGLEP AHRCSMDDWM
TMVDTNIKGL LHVTRALLPG MVERGRGHVV NLGSITGTYA YPGANVYGGT KAFVMQFSRG
LRADLHGTGV RVTNIEPGLA ESEFSVVRFG GDADRVAKLY EGASALRPED IADTIAWAVS
CPAHVNVNRI EVMPTSQSFG ALPVHRA
|
|---|
| |