| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0355 |
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| Symbol | |
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| ID | 7172239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 412711 |
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| End bp | 415443 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643538853 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002434780 |
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| Protein GI | 218885459 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0171458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAC AGTACCTGCG CATCAAGGAC GACTATCCGG ATGCGCTGCT GCTCTACCGC
ATGGGCGACT TCTACGAAAT GTTCTTCGAC GATGCGGAAA CGGCGGCGCG CGAACTGCAG
ATCGCCCTCA CCTGCCGCAA CCCCAACGCC GACCTGCGCG TGCCCATGTG CGGCGTGCCC
CACCATTCGG TGGAAGGGTA CATCACCCAA CTGCTGGAAA AGGGCTTCAA GGTGGCCCTG
TGCGACCAGA TAGAAGACCC GCGCGAGGCC AAGGGGCTGG TCAAGCGCGC CGTGACCCGC
GTGCTGACCC CCGGCACGGT GGTGGAGGAC GCCAACCTCG ACGCCAAGGG CCACAATTAT
CTGGGCGCGC TGTTCTGGGA CGAGGAAAAG GAGGCGGGCG GCTTTGCCTG GCTCGATTTT
TCCACGGGCG AATGGTCGGG CCTGCATGCG AAAAAGGCCG CCGACCTGTG GCAGTGGGTG
CGCAAGATGC AGCCCCGCGA ACTGCTGGTG ACCGAAAGCG CGCAGGTGCC CTCGTCCATG
TCGCTCACCT CCACCCAGGT GGTGCGGGTG CCGGGCCGGG CGCCCTTCGA CCTCAAGGCC
GCCACGGAGC GGCTGCTGCA CGCCCAGGGC GTACGCGACA CCGGCGCGCT GGGCCTTGAA
GGAAAGGATG AACTCGTCCG TTCCTGCGGG GCGCTGCTGG CCTACGTCGT GCAAACCCAG
AAGCAGGACA TCATTCACCT TGCGCCGTTC CGCCCCCTGA ACCTGGGCCG CCACCTCATC
GTCGATGAAG TGACGGAGCG CAATCTGGAG ATCTTCCGTC GCCTGGATGG GCGCAAGGGG
CCGGGCACGC TGTGGCACGT GCTGGACCAC ACCCAGACCC CCATGGGCGG TCGCCTGCTG
GAAGAACGCC TGCGCCACCC CTGGCGCGAG ATGGGCCCCA TAGAGGAAAC CCAGGCGGCG
GTAAGCTGGC TGTTCGAGCG CGATGACACC CGGCGCGACC TGCGGGCCGG GCTGGACGAG
GTGTACGACC TTGAACGGCT GACCACGCGC ATCTTCCTGA ACCGCGCCGC CCCCAAGGAC
TACGTGGCCC TGCGCCAGAG CCTGGCCGCC CTGCCCAAGG TGCGCGGCGT GCTGGAACGG
ACGGAAACGC CCCACGGCGG CTACCCCACC GACGGCGAGG CGCGCGGCGA TGGCCGCCCC
CCCTTCCTGC GCGCGGCGCT GAAGGGCTGG GACGACCTGT CCGACTATTT CGACCTGCTG
GAACGCGCGC TGGTGGACAG CCCGCCCCAC CTGGTCACCG AAGGCGGGCT GTTCCGGCCC
GGCTTCCACG CCGAACTGGA CGAACTGCTC GACCTGACCG AACACGGCGA GAACATGTTG
CAGCAACTGC TGGCGGAGGA ACAGGCCGCC AGCGGGCTGC CCAGGCTCAA GCTGGGCTTC
AACCGGGTGT TCGGCTACTA CTTCGAGCTG TCGCGCACCG CGTCCGACGC CGTGCCCGAA
CACTTCGTGC GCCGCCAGAC CCTGGCCAAC GCGGAACGCT TCACCACTCC GCGCCTGAAG
GAACTGGAAG AAAAACTGGT CTCGGCCAGC GACCGCCGCA AATCGCTGGA ATACAAGTTG
TTCCAGAAGC TGCGCGAAAC CGTGTCCGAG GCGCGCCCCC GCGTGCTGTT CATGGCCGAT
CTGTTGGCAG GGTTCGACTA TTGGCAGAGC CTTGCGGAAA CGGCCCGCCG CTGGAACTGG
ACCCGCCCCG TGCTGGCGCA GGATGCCGAC ATCCTGATCC GCGAAGGCCG CCACCCCGTG
GTGGAGGCCA TGCAGGGCAG CGCCAACTTC ATCCCCAACG ACCTGCGCAT GGACGAGGCC
CGGCGGCTGC TGCTGATCAC CGGCCCCAAC ATGGCGGGCA AATCCACCGT GCTGCGCCAG
ACGGCCATCA TCTGCCTGCT GGCCCAGATG GGCTCGTTCG TGCCCGCGCG CGAGGCGCGC
CTGGGCATCG CAGACCGGGT ATTCTCTCGG GTGGGCGCAT CGGACAACCT GGCGCAGGGG
CAGTCCACCT TCATGGTGGA AATGATGGAA ACCGCGCGCA TCCTGCGCCA GGCGGGCAAG
CGCAGCCTAG TCATCCTGGA CGAGATAGGA CGCGGCACCA GCACCTTCGA CGGCCTGGCC
CTGGCCTGGG CCGTGGTGGA AGAGCTGGCC CGCCGCGCGG GCGGCACCAT CCGCACCCTG
TTCGCCACCC ACTACCACGA GCTGACCGCG CTGGAAGGGC GCATCCCCGG CGTGCACAAC
ATGAACATCG CCATCCGCGA ATGGGGCGGC GAAATCGTGT TCCTGCGCCG CCTGGTACCC
GGCCCGTCCG ACCGCAGCTA CGGCATCGAG GTGGCCCGGC TTGCCGGGGT GCCGCAGCCG
GTGGTACAGC GCGCACGGGA ACTGCTGCAC GAACTGGAAA AAGCCCGTGA CGGCAGGGGT
GAAGCCCCCC GCACCGCGCG CGCCGTGCTG CCGGGGCTGG ACATGCCCGA ACCGAAGCAG
GCCGCCAAGC CGCGCGCCCT GCTTGCCGCG CGGGCGGAAC CGGTGGCCCA TCCGCTGCTG
ACCACCCTGC GCGACCTGGA TACCGACCAC CTTACGCCCA TGGGGGCGCT GCAACTGCTC
AACGAATGGA AACTGCTCTG GGGAGGCCCA GCCCATGCCG AAGATACCGT TCCCGACCAG
CCCCCGGCAG CGCCGGGAGA CGACCGTGAC TGA
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| Protein sequence | MFEQYLRIKD DYPDALLLYR MGDFYEMFFD DAETAARELQ IALTCRNPNA DLRVPMCGVP
HHSVEGYITQ LLEKGFKVAL CDQIEDPREA KGLVKRAVTR VLTPGTVVED ANLDAKGHNY
LGALFWDEEK EAGGFAWLDF STGEWSGLHA KKAADLWQWV RKMQPRELLV TESAQVPSSM
SLTSTQVVRV PGRAPFDLKA ATERLLHAQG VRDTGALGLE GKDELVRSCG ALLAYVVQTQ
KQDIIHLAPF RPLNLGRHLI VDEVTERNLE IFRRLDGRKG PGTLWHVLDH TQTPMGGRLL
EERLRHPWRE MGPIEETQAA VSWLFERDDT RRDLRAGLDE VYDLERLTTR IFLNRAAPKD
YVALRQSLAA LPKVRGVLER TETPHGGYPT DGEARGDGRP PFLRAALKGW DDLSDYFDLL
ERALVDSPPH LVTEGGLFRP GFHAELDELL DLTEHGENML QQLLAEEQAA SGLPRLKLGF
NRVFGYYFEL SRTASDAVPE HFVRRQTLAN AERFTTPRLK ELEEKLVSAS DRRKSLEYKL
FQKLRETVSE ARPRVLFMAD LLAGFDYWQS LAETARRWNW TRPVLAQDAD ILIREGRHPV
VEAMQGSANF IPNDLRMDEA RRLLLITGPN MAGKSTVLRQ TAIICLLAQM GSFVPAREAR
LGIADRVFSR VGASDNLAQG QSTFMVEMME TARILRQAGK RSLVILDEIG RGTSTFDGLA
LAWAVVEELA RRAGGTIRTL FATHYHELTA LEGRIPGVHN MNIAIREWGG EIVFLRRLVP
GPSDRSYGIE VARLAGVPQP VVQRARELLH ELEKARDGRG EAPRTARAVL PGLDMPEPKQ
AAKPRALLAA RAEPVAHPLL TTLRDLDTDH LTPMGALQLL NEWKLLWGGP AHAEDTVPDQ
PPAAPGDDRD
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