Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0325 |
Symbol | |
ID | 7172207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 378996 |
End bp | 380501 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643538821 |
Product | methyl-viologen-reducing hydrogenase delta subunit |
Protein accession | YP_002434750 |
Protein GI | 218885429 |
COG category | [C] Energy production and conversion |
COG ID | [COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 0.393409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTCC TGAAGGGGAA GGAACTCCGC GTCGTAGGGT TCCTGTGCAA CTGGTGCTCG TACGGCGGTG CCGACACCGC CGGGGTCGGG CGATTCTCGC AGCCCACGGA CCTGCGCATC ATCCGCGTGC CCTGTTCCGG CCGCGTGGAC CCCATGTTCG TGGTCAAGGC GCTGCTTGGC GGCGCGGACG GGGTGCTGGT TTCCGGCTGC CACCCGCGCG ACTGTCACTA CAGCCAGGGC AACTTCTATG CCCGGCGTCG ACTTGAAACA CTGAAGACCT TCCTGCCCGC CCTCGGCATC GACCCGGACC GCTTCCAGTA CACCTGGGTT TCCGCGTCGG AAGGGCAGCG CTGGAAGAAC GTGGTCTCCA CCTTTGTCGA AAAGGTGCAC CAGCTGGGGC ATGCCCCGCG CATAGAGGAA GCCGCTCCGT ACCTGCCGCT GGCGGCGGGG GGCGACAGCC CGCGCGCGCC GCTGCGCCCG CCCCTGCGTC CGTTGTCGTA CCCGGCGGCG GGAACGCTGG CCGCATCGCT GGAGCAACTG CGCGAAAATA TCCGCGCGGC GCTGCCGGAA CTGGATTGCG TCATCGGCTG GCAGCAGGGC TTTGACGCGC TGCACGCCAC GCCGCTGTTC ATGCGCAAGC CGGAAGACGT GGACAAGCTG ACCTGGGGGC CGCTGAACGT GCACAACCTG GCCACCTACC TGCCGCAGTT CAAGAACCGC AAGGTGGGCG TGGTGGTGAA GGGGTGCGAC AGCCGCTCGG TCATCGAGCT GTTGCAGGAA AAGCTGGTGG AGCCCGACAA CGTGCGGGTG TTCGGCATGG CCTGCGAGGG CGTGGTGGAC ATGACCCGCG TGCAGAGGGC GCTGGACGGC ACCGGTAACG CGGATGGCGC GATGTGCGCA GACACGGCGC CTTCTTCGGT GGGCGTTGAC GGCGACAACC TGTCCTTTGA AGGCGAGGCC CCCGCCCGGC TCAAGCTGGC CGACGTGGTG GCCGAAAAGT GCCGCACCTG CGACACCCCG GTGCCCCTCT TGGGCGACGT GGTGGAGGGC AACGCCTCCG CCCCCGCTGG GCCCGCGCCC GACGCGCCGC CCAGTCTCGA AGCCCTGGAC GCCATGACCC CGGAACAGCG GCGCGGCTTC TGGCGCGCCC AGATGGACCG TTGCCTGCGC TGCTACGCCT GCCGCAATGC GTGCCCCATG TGCGTGTGCC GCGACCACTG CATTGCCGAA AGCCGCGACC CGCACTGGAC CACCCAGGAA GGCAACGTGC GCGAGAAGTT GCAGTTCCAG GTCATCCACG CCCTGCACCT GGCCGGACGC TGCACCGAAT GCGGCGAATG CCAGCGGGCC TGTCCGGTGA ACATCCCGGT GCTGTCCCTC AAGCAATGGA TGAACCGTTC GGTGCGCACC CTGTTCGACT ACCGCGCAGG CGTTGACGTG AACGCGGTGC CGCCGCTGCT GGCCTTTGCC GTGGAAGAAA AGAACATCAA GGAGCATGGG CTGTGA
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Protein sequence | MPVLKGKELR VVGFLCNWCS YGGADTAGVG RFSQPTDLRI IRVPCSGRVD PMFVVKALLG GADGVLVSGC HPRDCHYSQG NFYARRRLET LKTFLPALGI DPDRFQYTWV SASEGQRWKN VVSTFVEKVH QLGHAPRIEE AAPYLPLAAG GDSPRAPLRP PLRPLSYPAA GTLAASLEQL RENIRAALPE LDCVIGWQQG FDALHATPLF MRKPEDVDKL TWGPLNVHNL ATYLPQFKNR KVGVVVKGCD SRSVIELLQE KLVEPDNVRV FGMACEGVVD MTRVQRALDG TGNADGAMCA DTAPSSVGVD GDNLSFEGEA PARLKLADVV AEKCRTCDTP VPLLGDVVEG NASAPAGPAP DAPPSLEALD AMTPEQRRGF WRAQMDRCLR CYACRNACPM CVCRDHCIAE SRDPHWTTQE GNVREKLQFQ VIHALHLAGR CTECGECQRA CPVNIPVLSL KQWMNRSVRT LFDYRAGVDV NAVPPLLAFA VEEKNIKEHG L
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