Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0312 |
Symbol | |
ID | 7172194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 360067 |
End bp | 362688 |
Gene Length | 2622 bp |
Protein Length | 873 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643538808 |
Product | peptidase S16 lon domain protein |
Protein accession | YP_002434737 |
Protein GI | 218885416 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 0.345035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTC CCAAGAAGGC GACCAAACGC ACCGCTGCCT CTGCCGCATC TTCGACTTCG TCCGCACACG CGCCCTCTGC CGCGTCTTCT TCCGCGTCCG TGCCGGGCGG CGGGGCGCTG CCCGCACCGC TTGCGCCCGA ACAGCTGCGC TGGACGCTGG ACCCCGCAAC GCTGCCCTTT GCCCATACCG GCGAGGTGGA TGAGCAGGCC GACATCATCG GGCAACGGCG GGGGGTGGAT GCCTTTCGTT TCGGCATGGG CATGCATGGC AAGGGCTACA ACATCTTCGT CACCGGGGCC GTGGGCATCG GCAAGCTGTC CATGGTCAAG CGGCTGCTGG GCAACGGCGC CAACGGAGCG GCCACGCCCG ACGACCTGTG CTTCGTGAAC AACTTCAAGA CGCCGGAAGA ACCCATCCTG CTGCGCTTTC CCGCGGGCAA GGGCCGCGCC TTCAAGGCCG ACGTGCAGGC GTTCCTGGAC ACGGTGAAGC GCGACATTCC GCAACTGTTC GAAAGCCAGG AATACATCGC CAGCAAGAAC GAGATCATCG AGGCGCACGA CAGGAAGACC CGCGAGTTCT TCAAGAACCT CGAAACCAAG GTGCGCGATT CCGGCTTTGT GCTGGTGAAC ATGCAAATGG GCCAGATCCA GCGGCCCGAC ATCGTGCCCA TCGTGGACGG CGAGCCGGTG CACCTGCTGA AGCTGGAGGA AATGGCCGCC AAGGGGCGCT TTCCGCGCGA GGAGCTGGAA AAGCTTCAGG AAACCTACAA GACTCTGAAG GAAGAGATCG ACGCCATCTT CCTGGACGTG CGCGAACTGC AAAAGGAAGT GAAGCGCAAG ACCGAAGAGG TGGACCGGCT CATGTTCATG AGTTCGGCGC GCGATCTGGC CCGCCCGCTG CTGGAAGGCT ACACCGACCC CAAGGTGCAG AAGCATGTGG AGGCGGTGCT GGCCGACATG GCAGAAAACC TGGACGGCCT GAAGGTGATG GGCCAGCAGG TGCAGGGGCC CATGGGCATG TTCGTGCCCG CCCCGGCGGA AGCGGTGCTG CACCCCTACC AGGTCAACCT GCTGGTGGAC AACGCCGAGC TGGAAGGCCC GCCGGTGATC GTGGAATCGT TCCCCAACTA CCGCAACCTG TTCGGGTCCA TCGAGCGGGT CATGGACCGT TCCGGCCTGT GGCGCACCGA CTTCACCAAG ATCAACGCCG GTTCGTTCGT CAAGGCCAAC GGCGGGTATC TGGTGCTGAA CCTGATGGAC GCCATCATGG AACCGGGGGT GTGGCAGACC CTCAAGCGCG CCCTGAAGAC GTCGGAAATA GAGATCCAGA CCTTCGATCC TTACTACTTC ATCACCGCCA CGGGCATTAA GCCGGAATCC ATCAGCATGG AGGTGAAGGT GGTGGTCATG GCCACGCCGC AGCTGTACCA CATGCTGCGC CACTACGACC CGGACGTGCA GAAGATCTTC AAGGTGTGGG CGGACTTCGA TTCGTCCATG CCGCTGGACG AGGCGTGCGT CACCGAGGTG GCCAAGCTGA TGAAGACCTT CGTGGCGGCG CGCAACCTGC GCCAGTTCGA CGCCACCGCC GTGGCCGCCC TGCTGGAGCA CGGCGTGCGC ATGACCGGGC GGCGCGAAAA GCTGACCACC TCGTTCCCGG TGCTGCGCGA CATCATGGAG GAAGCCGACT ACATCGCCCG CGAGTCCGGG GCGGACATGG TTACCGCCGC ACACGTGACC CAGGCGGTGG AAGGGCGGCA GTACCGCGCC GGGCTCATCG AGGAGAAGGT GCAGGAGATG ATCGACCGGG GCAGCGTGTT CATCGACACC GACGGCGAGG TCGTCGGGCA GGTGAACGGG CTGGCCGTGT ACGCCATGGG CGACCACATG TTCGGCAAGC CTTCGCGCAT CACCGCCACC ACCTCCATGG GGCGCGAGGG CATCATCAAC ATCGAACGCG AATCGGACCT GTCCGGGGCC ATCCACAACA AGGGCATGCT CATCCTTTCG GGCTACCTGC GCCGGGCCTT CGCCCAGGAC AAGCCGCTGA CCCTGGCGGC ATCCATCGCC TTCGAGCAGT CCTACGGCGG GGTGGACGGC GACTCGGCCT CGTCCACCGA GCTGTACGCG CTGCTCTCCA GCCTTTCGGG CGTGCCCATC CGGCAGGGCA TTGCCGTCAC CGGTTCGGTG AACCAGAAGG GCGAGGTGCA GCCCATCGGC GGCGTGAACG AGAAGATCGA AGGCTTCCAC GAGGTGTGCA GGCGCAAGGG GCTGACCGGC GGTCAGGGGG TGCTGATACC CGCCGCCAAC GTCAACGACC TGATGCTGAA GCCGGAAGTG CTGGATTCGG TCCGCGCGGG CACCTTCCGC ATCTGGGCCG TGCGCACGGT GGACGAGGGC ATCGAACTGC TGACCGGCGT GCCCGCCGGG GTGCGCGGCG CGGACGGCAA CTACCCGCCC GATACCGTGT ACGGCAAGGT GGATGCGCGG CTGCGCGAAC TGGCCGAGGG GCTGCGCAGC TTCGGCGAAA AGAAGGATGA GAACGGCAAC GGGAAGGAGA AGGGCAAGCG CGCCAAACCT TCCAGGGGGC CGAACAAGGA TCCTGAAGAC AGGAAGAAAT AG
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Protein sequence | MTTPKKATKR TAASAASSTS SAHAPSAASS SASVPGGGAL PAPLAPEQLR WTLDPATLPF AHTGEVDEQA DIIGQRRGVD AFRFGMGMHG KGYNIFVTGA VGIGKLSMVK RLLGNGANGA ATPDDLCFVN NFKTPEEPIL LRFPAGKGRA FKADVQAFLD TVKRDIPQLF ESQEYIASKN EIIEAHDRKT REFFKNLETK VRDSGFVLVN MQMGQIQRPD IVPIVDGEPV HLLKLEEMAA KGRFPREELE KLQETYKTLK EEIDAIFLDV RELQKEVKRK TEEVDRLMFM SSARDLARPL LEGYTDPKVQ KHVEAVLADM AENLDGLKVM GQQVQGPMGM FVPAPAEAVL HPYQVNLLVD NAELEGPPVI VESFPNYRNL FGSIERVMDR SGLWRTDFTK INAGSFVKAN GGYLVLNLMD AIMEPGVWQT LKRALKTSEI EIQTFDPYYF ITATGIKPES ISMEVKVVVM ATPQLYHMLR HYDPDVQKIF KVWADFDSSM PLDEACVTEV AKLMKTFVAA RNLRQFDATA VAALLEHGVR MTGRREKLTT SFPVLRDIME EADYIARESG ADMVTAAHVT QAVEGRQYRA GLIEEKVQEM IDRGSVFIDT DGEVVGQVNG LAVYAMGDHM FGKPSRITAT TSMGREGIIN IERESDLSGA IHNKGMLILS GYLRRAFAQD KPLTLAASIA FEQSYGGVDG DSASSTELYA LLSSLSGVPI RQGIAVTGSV NQKGEVQPIG GVNEKIEGFH EVCRRKGLTG GQGVLIPAAN VNDLMLKPEV LDSVRAGTFR IWAVRTVDEG IELLTGVPAG VRGADGNYPP DTVYGKVDAR LRELAEGLRS FGEKKDENGN GKEKGKRAKP SRGPNKDPED RKK
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