Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0256 |
Symbol | |
ID | 7172136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 291552 |
End bp | 293303 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643538751 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002434681 |
Protein GI | 218885360 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.0139167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CCAACACCTC CGCCGATTTC CCCTGGCTGG CCAGCTACGA TGCGGGCGTT CCCGCGAACA TCAGCTACGA AACCTTTCCG CTGTTCACCC TGCTGGACAG GGCCGCGGAA CGCACCCCCC GCCGCACGGC CATCGCCTTC CGCAACTATC GCATCAGCTA CGCCAAACTG CGCCAACTGG CGGAGGTCAT GGCCGCCAAC CTGCGCGCCC AGGGCGTGCG GCGCGGCGAC AAGGTGTCGA TCATGCTGCC CAACCTGCCG CAGACGGTCA TTGCCTTCTG GGCGGTGCTG AAGGCGGGCG GCGTGGTGGT GATGACCAAC CCGCTGTACA TGGAAAAGGA ACTGGTCCAC CAGATCCACG ACTCCGGCGC GCGGTTCATG ATCGCCCTCG ACCTGGTGTG GCCCAAGATA GAGCCGCTGC GCGAAAAGCT GGGCATCGAC AAGTATTTCC TCACCCGCAT CGGCGACGGG TTGGCCTTTC CGCTCAACTT CCTGTACGCC TTCAAGGCCA AGCGCGAAGG CACCTGGCGC GAGCTGCCCT TTGACGGCAG GCACGTGCTG CCGTGGAAAA CCCTGCTCAA GGGCAAGGTC CGCCATTCCA CCACCACGTG CAACCCCACG GAAGACCTGG CCGTGCTGCA ATACACCGGC GGCACCACAG GCATTTCCAA GGGGGTCATG CTGACGCACC ACAACATGTC GGTGAACGTG CAGCAGATCA CCACCATTTT GGGCGACGCC CGCGACATGG ACCACTGTTT CCTGGGGCTG ATGCCCTACT TCCATGTCTA CGGGCTGACC ACCTGCCTCA CCCTGCCCAC GGCTCTTGCG GCCACCATCG TGCCCTTCCC GCGCTATGTC CCGCGCGACG TGCTGGTGGG CATCCAGAAG CACAAGCCCA CCATCTTCCC CGGCGCGCCC TCCATCTACA TCTCGCTGAT GCAGCAGAAG GAGGTGGGCG ACTACGACCT GACCTCCATC CGCTACTGCA TTTCGGGGTC GGCACCCATG CCGGTGGAGC ACATCAAGCG GTTCAGAGAG CTTACCGGCG CGCAGGTCAT CGAGGGCTTC GGCCTGACGG AGGCCTCGCC GGTCACCCAC CTGAACCCCA TCCACGGGGT CAGCAAGACC GGGTCCATCG GCATCCCCTT TCCGGACACC GAGGCGCGCA TCGTGGACAT GGAGGTGGGC CAGGTGCCGC TGCCCGCAGG CAAGGTGGGC GAACTGATCA TTCGCGGCCC GCAGGTCATG AAGGGCTACT GGAATCGCCC GGACGAAACC GCCAACACCC TGCGCAACGG CTGGCTGTAC ACCGGCGACA TCGCCATCAT GGACGAGGAC GGCTACTTCA CCATCGTGGA CCGCAAGAAG GACATGTTCC TGGTGGGCGG CTACAATGTC TACCCGCGCG AGATCGACGA GGTGCTGCAC GAGCACCCCA AGATCAAGGA AGCGGTGACC GTGGGCGTAC CCCACCCCAC GCGCGGCGAG ATGATCAAGG CCTTCGTGGT GGTAAAGCCC GGCGAAAAGC TGACCAAGGC CGAGGTCGTG GCCCACTGCC GCGAAAAGCT GGCCAGCTAC AAGGTGCCCA AGCAGGTGGA ATTTCGCGAC GACCTGCCCA AGACCGTGGT GGGCAAGGTA CTGCGCCGCA TCCTGCGCAC CGAGGAAGAA GAGAAGCTGA AGGCGGAACT GGCCGCGTCT CCCGCAACAG CCGCCGCGTC CGACGACGAC GGAGCGCAGT AG
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Protein sequence | MTEPNTSADF PWLASYDAGV PANISYETFP LFTLLDRAAE RTPRRTAIAF RNYRISYAKL RQLAEVMAAN LRAQGVRRGD KVSIMLPNLP QTVIAFWAVL KAGGVVVMTN PLYMEKELVH QIHDSGARFM IALDLVWPKI EPLREKLGID KYFLTRIGDG LAFPLNFLYA FKAKREGTWR ELPFDGRHVL PWKTLLKGKV RHSTTTCNPT EDLAVLQYTG GTTGISKGVM LTHHNMSVNV QQITTILGDA RDMDHCFLGL MPYFHVYGLT TCLTLPTALA ATIVPFPRYV PRDVLVGIQK HKPTIFPGAP SIYISLMQQK EVGDYDLTSI RYCISGSAPM PVEHIKRFRE LTGAQVIEGF GLTEASPVTH LNPIHGVSKT GSIGIPFPDT EARIVDMEVG QVPLPAGKVG ELIIRGPQVM KGYWNRPDET ANTLRNGWLY TGDIAIMDED GYFTIVDRKK DMFLVGGYNV YPREIDEVLH EHPKIKEAVT VGVPHPTRGE MIKAFVVVKP GEKLTKAEVV AHCREKLASY KVPKQVEFRD DLPKTVVGKV LRRILRTEEE EKLKAELAAS PATAAASDDD GAQ
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