Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0210 |
Symbol | |
ID | 7172090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 230566 |
End bp | 232344 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643538708 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002434638 |
Protein GI | 218885317 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.019468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCAAGG CGCAAGCCGG GTTGACCTAT CAACAGTTCT GTGTGGCCGT GACGTGCACG GTTCTTCTGC TGTTGGCCGC GTGGCCGGAT TCCGCGGCCC GGGCGGAGCG GGAGATGGCA CAGGGTGCCT TCGCCTCCGG ACCGACCTGT GGCCCGACAG GCAACCCGAT CGGACCTTCG TTCACCAATC CCGCCCATCC CGCCCCTTCC GCGCCTGCCC CTGATTTCCA GAATGCCGAG GCAGGAACGG GCCTTGCCAT CCCCGCTGCC GTCCCCGCTG CCGTCAGGGC CACCGCATCC GGCGGTCCTT CCCGCATTGC CGCCACCCGG ACGCCGGGCT TCCCCACCGG TAGTCTGGTT GCCCAGGATT CCCGCGCTGC CGGGGTGCCC GCCACCGCCG CCGCCCCTTT CGCTTACACG GGTGAGACCG TAGCACCTGC CGACGTGCCT TCCGGTGTTC CTTCCGGTTC GAACCAGCCC CGTTCGGCGG CTGTCAGTCC CGCAGATGCC AAACCGTCAG CGGACAGTCC GGCAGGGGGC GAACTGGCCC CCGGCGAACC GGTGCGCCTG GGCATGTCCG CTCCCTTCAG CGGTCCCGGC GTGTCGCTGG GGCGCGAATT CCATCGCGGC GCGGCCAGTT GCCTGGCCCG GGTCAACGCG GCTGGCGGGG TACACGGCAG GCGCGTGGAA ATCGTGGCCA TGGACGATGG CTACGACCCG GACCGCACCG TGCGGAATGT CATCAGGCTC ATAGAGGAAG AGCGGGTTTT CGCGCTGTTC GGTCTGGTGG GCACACCCAC GGTCACGCGG GTGCTGCCGC TGCTTGGCGG CCACCCGGAG CGCACGGTGC CGCTGCTGTT CCCCTTCACC GGGGCGCGGC CCCTGTCCCT GCCGCGTCAC GAGGGGCTGG TGTTTCGCCT GCGGGCCTCG TATGACGCCG AATTTTCCGA ACTGGTGGAC CGCCTGCATG ACGCGGGGTG CTCCCGCATC GCCGTGTTCT ACCAGGCCGA CGCCTATGGC CGTGAAGGCT GGGCCGACCT GCGTGATGCA CTGGCCCGCC GCCGCCTGCC CCTGGCGGCG GAGGCCTCCT ACCCGCGTGG GTCGGGAAGC GACGCCGATT TCACCGAACA GGCGGGGCTG ATCCTGCAAG GCATGCCCGA CGCCGTGGTC TGCGTGGGTA CCGACGCCAC GTGCGCGGCC TTCATCCGGG ACCTGCGCGA CGTTCCGGCC GCACGGGGCG CCAAGCGGCA GGCGGGCCAG CCTTCCCCCC AGTTCTCCGG CAAGGGCGGG CCCGCCATCC CCGTGGCCAT GCCGTCTTTC GTGGACAGTC GCCAGTTGGT GGACCTGCTG GTAGCCATGG GGCGCTCGGT ACGGCGTGAC TACACGCACG ATCTCGTGCT GACGGAAGTG GTGTCTCCAT GGACCGGCAA CCTGCCAGCC GCCATTGACT ATCGCCGTGA TTTCGCTGAG ATGGCGGATG TCCCCGACGT GCTGGACATT CCCGGCAACG ACGCGGCCCC GCCGTCGGCA CCGGGCGAGG TGAGCTTCGA GGGGTACCTG GCCGCGCGGC TGCTGGTGCG GGCACTGGAA CGCATGGGGC CGCACCCGTC GCCCGCTGGA CTTCACGAGG CCCTGGTCGG GCTTGACGGT TACGACCTGG GCGTTGGCCA GCCGTACCGC TACACCCCAA CCGAACAGGG CCTGGGGCTG GTGCGCTTCG CCACCGTGCG CGGCGGCGTG CCGGTGGACC TGCGCGACTT TTCGGAGTGG CGGCGATGA
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Protein sequence | MCKAQAGLTY QQFCVAVTCT VLLLLAAWPD SAARAEREMA QGAFASGPTC GPTGNPIGPS FTNPAHPAPS APAPDFQNAE AGTGLAIPAA VPAAVRATAS GGPSRIAATR TPGFPTGSLV AQDSRAAGVP ATAAAPFAYT GETVAPADVP SGVPSGSNQP RSAAVSPADA KPSADSPAGG ELAPGEPVRL GMSAPFSGPG VSLGREFHRG AASCLARVNA AGGVHGRRVE IVAMDDGYDP DRTVRNVIRL IEEERVFALF GLVGTPTVTR VLPLLGGHPE RTVPLLFPFT GARPLSLPRH EGLVFRLRAS YDAEFSELVD RLHDAGCSRI AVFYQADAYG REGWADLRDA LARRRLPLAA EASYPRGSGS DADFTEQAGL ILQGMPDAVV CVGTDATCAA FIRDLRDVPA ARGAKRQAGQ PSPQFSGKGG PAIPVAMPSF VDSRQLVDLL VAMGRSVRRD YTHDLVLTEV VSPWTGNLPA AIDYRRDFAE MADVPDVLDI PGNDAAPPSA PGEVSFEGYL AARLLVRALE RMGPHPSPAG LHEALVGLDG YDLGVGQPYR YTPTEQGLGL VRFATVRGGV PVDLRDFSEW RR
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