Gene DvMF_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0099 
SymbolsecY 
ID7171973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp109782 
End bp111095 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content62% 
IMG OID643538592 
Productpreprotein translocase subunit SecY 
Protein accessionYP_002434528 
Protein GI218885207 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.0986849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTTA GTGGTGTAGA AAACCTGGCG CGTCTGCCGG AGCTTCGCAA GAAGCTCTTC 
TGGACGTTCC TGTTGCTGGC CGCATACCGC ATCGGGGTTC ACGTCCCGGT TCCCGGGGTG
GATTCCGGAG CGCTGGCCGA CTTCTTCGCC AGCGTCCAGA ACACCCTTTT CGGCCTCTTC
GACATGTTCT CCGGGGGCGG GCTCCGCAAT CTGTCGGTGT TCGCCCTCGG CATCATGCCC
TACATCTCTG CCTCCATCAT CATCCAGCTT CTCCAGGTCG TCAGTCCTGA ACTGAAGCGG
ATGGCCAAGG AGGAAGGGGC GGCGGGCCGC CGCAAGATCA CCCAGTACAC CCGGTACGCC
ACGGTGCTCA TCACCGTGAT CCAGGGCTTC GGCATCGCCG TGGGCCTGGA GAACATGCAC
AGCCCCGCGG GCGCGCCCGT GGTGCTGGAT GCTGGCTGGG GCTTCCGGAT GATCACCATC
GCAACCCTTA CCGCCGGTAC CGTGCTGATC ATGTGGCTTG GCGAGCAGAT TACTGAGAAG
GGCATCGGCA ACGGCATTTC GCTGATCATC TTCTCGGGCA TCGTCGCCGG TATTCCCGGC
GGCATCGTCA AGTCCGGCCA GCTCATCAAG GCCGGCGACA TGAGTGTGTT CACGGCGATT
CTGGTGCTGG CGCTGATGGC GGTGGTGCTT GGCTGCATCG TGTTCATGGA ACGCGGACAG
CGGCGCATCC CCATCCATTA CGCCAAACGA CAGGTTGGCC GTAAGATGTT CGGCGGGCAG
AGCACGCATC TGCCGTTGCG CATCAATACG GCGGGCGTCA TTCCGCCCAT CTTCGCCTCG
TCGCTGCTGC TGTTCCCCGC GACCATCGCC AGCTTCTCGG CCAACGAGAC GCTCCAGCGC
GTGGCTGCGT GGTTCGCGCC GCACACGGTG ATGTACAACA TCCTGTTCAT CAGCCTCATC
GTGTTCTTCT GCTTCTTCTA CACGGCGATC ATCTTCGATC CGAAGGATAT CGCCGAAAAC
CTGAAGAAGG GCGGCGGGTT CATCCCCGGC ATCCGTCCCG GGGACAAGAC CCGGCAGTAC
ATCGACAGGG TGCTTACCCG GATGACCATC TGGGGGGCCA TCTACATATC CGCTATCTGC
GTCCTGCCCA TGATCCTCAT CGCGCAGTTC AACGTGCCGT TCTACTTCGG CGGCACCAGC
GTGCTGATTC TCGTGGGCGT GGCCATGGAC TTCATGTCCC AGGTGGAATC GCACCTGATC
TCACGGCAGT ACGAGGGTCT CATGAACAAG ACCCGCATCA AGGGACGGCA GTGA
 
Protein sequence
MALSGVENLA RLPELRKKLF WTFLLLAAYR IGVHVPVPGV DSGALADFFA SVQNTLFGLF 
DMFSGGGLRN LSVFALGIMP YISASIIIQL LQVVSPELKR MAKEEGAAGR RKITQYTRYA
TVLITVIQGF GIAVGLENMH SPAGAPVVLD AGWGFRMITI ATLTAGTVLI MWLGEQITEK
GIGNGISLII FSGIVAGIPG GIVKSGQLIK AGDMSVFTAI LVLALMAVVL GCIVFMERGQ
RRIPIHYAKR QVGRKMFGGQ STHLPLRINT AGVIPPIFAS SLLLFPATIA SFSANETLQR
VAAWFAPHTV MYNILFISLI VFFCFFYTAI IFDPKDIAEN LKKGGGFIPG IRPGDKTRQY
IDRVLTRMTI WGAIYISAIC VLPMILIAQF NVPFYFGGTS VLILVGVAMD FMSQVESHLI
SRQYEGLMNK TRIKGRQ