| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0034 |
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| Symbol | |
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| ID | 7171906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 43413 |
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| End bp | 45029 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643538525 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002434463 |
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| Protein GI | 218885142 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 0.677331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC CTGCCCGCAC TCTCGCACTG GGGACACAGG CCCCCGCCGT GCCCGCTGCT
TCCCGTTGTC TGCCGCTTCT GCTGCTCCTG CTGTTCATGC TTTCCGCATG CGCCAAGGTG
GGGCCTGATT TCAGCGCGCC GGACACCGCC ATGCCGACCG GATGGCAGGA TGCCGCCGTG
TTGGGCGCCA CCGCCACCCG CGAGGTGAGC GAGGAGTGGT GGCGTACCTT CGACGACGCC
ACCCTGAACG GGCTGCTGGC CGAGGCGCGC GGCGGCAATC TTTCGTTGCA GGTGACCGCC
CTGCGGGTGC TGGAAGCCCG CGCCCGCCTT GGCGTTGCCG TGGGCAACCT GTACCCGCAA
CGGCAGCAGG CCACCGGTGG CCTGACCTGG ACCCATCCCA GCGACCGCAC GCCCACCGCC
CCCCAGCCCG GCACGGGCCG GGGCAACCCC GACTACGTGC AGACCAGCGT TGGCCTGGAC
GCCGCGTGGG AACTGGACTT CTGGGGCAAG TACCGGCGCG GCGTGGAAGC CGCAGACGCC
GACCTGCGCG CCGCCGCGGC CGACTACGAG GCGGCCATGG TGGCGGTAAC GGCGAATGTG
GCGCAGTCGT ACGTGCTGTA CCGCACCCTG CAACAGCAAC TGGCCATTGC CGACAACAAC
GTGGCCATCC AGCGCGAAAG CCTGCGCATC GCCACGGCGC GCTTCAACTA CGGGGCCACC
AGCGAGCGCG ACATGCGCCA GGCCCTTTCC CTGCTGCGCG ATACGGAAGC CAGCATCCCC
AGCCTGGCCC ATTCCCTGCG CGAGGCCCGC AACGCACTGT GCGTGCTGCT GGGCAAGCCG
CCGCAGGACC TCGCCGCCAT GCTCGGCACG GCCCCCATTC CCACGGCTCC GGCCGGTCTG
GCCCTGGGCA TTCCCGCAGA CCTGCTGCGC CGCCGCCCCG ACGTGCGCAA GGCCGAATAC
GCCGCCGCCG GGCAGTGTGC CCGGCTGGGC GTGGCCAAGG CCGACTTCTA CCCGTCCATC
TCGCTGGGCG GCTTCGTGGG GTTCACCGCC AGCAACGTGG GGGCCTTCAG CACGGGCGAC
ACCTTCTCGC ACGGGTTCAC GGCCTACGGC GGCCCCGGCC TGACCCTGCC GCTGTTCAAC
TACGGGCGCA TCGCGAACAA CGTGCGGGCG CAGGACGCCC GGTTCCAGCA GGCCCTGACG
GCCTACCGCG AAACGGTGCT GTCCGCCCTG CGCGAAACGG AGGACGGCAT CGACCGCTAC
CTCAACGCGC AGGGCAGGGC GGCCCTGCTG ACCGAAAGCG CCGCCGACGC CGCCCGGTCG
CTGGAACTGG CCATGGTCCA GTACCAGGAA GGCTCCACCG ACTTCACCAC CGTGCTCACC
GCCGCGCGCG ACCTTTCCAC GCGCCAGGAT GCGCTGGCCC AGGCCAGCGG CGAGATCAGC
CAGAGCCTCG TGGCCGTGTT CAAGGCGCTG GGGGGCGGCT GGCGCACCTT GCCCGAAAAC
GGGCCCATTC CGCTCGAAAC GCAGCGCGAG ATGCGTGCGC GCACCGACTG GGGCGCGCTG
CCCGAAGAGC ACGGCGCCGT GCCGGCCGGT GGCGACGTGC GCCCCCCCGA CATCTAG
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| Protein sequence | MTLPARTLAL GTQAPAVPAA SRCLPLLLLL LFMLSACAKV GPDFSAPDTA MPTGWQDAAV
LGATATREVS EEWWRTFDDA TLNGLLAEAR GGNLSLQVTA LRVLEARARL GVAVGNLYPQ
RQQATGGLTW THPSDRTPTA PQPGTGRGNP DYVQTSVGLD AAWELDFWGK YRRGVEAADA
DLRAAAADYE AAMVAVTANV AQSYVLYRTL QQQLAIADNN VAIQRESLRI ATARFNYGAT
SERDMRQALS LLRDTEASIP SLAHSLREAR NALCVLLGKP PQDLAAMLGT APIPTAPAGL
ALGIPADLLR RRPDVRKAEY AAAGQCARLG VAKADFYPSI SLGGFVGFTA SNVGAFSTGD
TFSHGFTAYG GPGLTLPLFN YGRIANNVRA QDARFQQALT AYRETVLSAL RETEDGIDRY
LNAQGRAALL TESAADAARS LELAMVQYQE GSTDFTTVLT AARDLSTRQD ALAQASGEIS
QSLVAVFKAL GGGWRTLPEN GPIPLETQRE MRARTDWGAL PEEHGAVPAG GDVRPPDI
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