Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0011 |
Symbol | |
ID | 7171883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 14550 |
End bp | 15929 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643538503 |
Product | serine dehydratase alpha chain |
Protein accession | YP_002434441 |
Protein GI | 218885120 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.0204845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTC TGGTCGCCAC CATAGAAACG TCGCTGTTCG ACATGTTCGA GGCCGGTCCC GGCCCGTCCA GTTCCCATAC CATCGGCCCC ATGAAGGCCG GGCACGACTT CCGCACACTG TGCGCGGCCC TGCCGCCAGA GGTGCTGGCC TGCGCGGCGG ACATCCGGGT GCGTCTGTTC GGCTCGCTGA GCGCCACCGG CGTGGGCCAC GGCACCACCG GCGCGGTGCT GGCCGGGCTG CTGGGGCACC GTCCCGCCAC CTGCCCGCCG GGGCTGCTGG AATCGTTGCC CGCGCTGCCG GAAGGGGAAC GCACCCTGCG CCTGGGCCCG GCGGCCCTGG TGCTGGCCGA AGGCACGGTG CGGCGCGATG CGGTGCAGCA CGCCTACCCC TTCAGCAACA CGCTGGTCAT GGAACTGCTG GATGCGCACG GCGCGGTGCT GTGCGAGCGC GAGTACTATT CCGTGGGCGG CGGGTTCATC CAGTGGAAGG GCTGGCAGCC CGAAGAACGC GGCAGGCCCG CGCACCCGTA CCGCAGCATG GCGCAACTGC GCGCGCGGCT GGTGGAAACC GGGCTGACCA TCCATGAACT GATCCTGGAA AACGAAATGG CGGTTACCGG CATGGGCCGT GCCGCCATCC TGGACCGGCT GGCCGCCATC ATCGAACTGA TGGAAGCCAG TGTGCGGCGC GGCATTGAGG ACGGCGGCCC GCTGCCCGGC ACCCTGGGGG TGCACCGCAA GGCCCGCGTG CTGCTGATGC GCGCCCAGCG CCTGCCCAAC GAGGTGGATG TCTTTCTGGG GCGGCTGAAC GCCTACGCCT TTGCCGCCGC CGAGGAAAAC GCGGCGGGCG GGGTCATCGT CACCGCGCCC ACCTGCGGCG CGGCGGGAGT GATGCCCGCG CTGCTCTACG CCATGCGCCA CGACCTTGCC ATCGGCGACC GGGCCGTGCG CGAGGGGGTG CTGGCATCGG CGGCGGTGGG CTTTCTGGCC AAGCACAACG CGGGCATCGC CGGGGCCGAG GTGGGCTGCC AGGGCGAGGT GGGCGTGGCT TCGGCCATGG CCGCCGCCAT GCTGGCCCAC GCGCGCGGCA ACCCGGTGCA CGTGGTGGAA AACGCGGCGG AAATCGCCCT GGAACACCAC CTGGGCCTGA CCTGCGACCC GGTGGGCGGC TACGTGCAGA TTCCGTGCAT CGAGCGCAAC GCCGTGGGCG CGGTGAAGGC CTACAACGCC TGCCTGCTGG CCACCTGCGA AGACCCGCGC CACCACCGGG TGACGCTGGA CAGCGTCATC GCGGCCATGG CCGAGATAGG GCGCGACATG AACGCCAAGT TCAAGGAAAC GTCGTCCGGC GGGCTTGCGG TCAGCGTGGT GGAGTGCTGA
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Protein sequence | MQPLVATIET SLFDMFEAGP GPSSSHTIGP MKAGHDFRTL CAALPPEVLA CAADIRVRLF GSLSATGVGH GTTGAVLAGL LGHRPATCPP GLLESLPALP EGERTLRLGP AALVLAEGTV RRDAVQHAYP FSNTLVMELL DAHGAVLCER EYYSVGGGFI QWKGWQPEER GRPAHPYRSM AQLRARLVET GLTIHELILE NEMAVTGMGR AAILDRLAAI IELMEASVRR GIEDGGPLPG TLGVHRKARV LLMRAQRLPN EVDVFLGRLN AYAFAAAEEN AAGGVIVTAP TCGAAGVMPA LLYAMRHDLA IGDRAVREGV LASAAVGFLA KHNAGIAGAE VGCQGEVGVA SAMAAAMLAH ARGNPVHVVE NAAEIALEHH LGLTCDPVGG YVQIPCIERN AVGAVKAYNA CLLATCEDPR HHRVTLDSVI AAMAEIGRDM NAKFKETSSG GLAVSVVEC
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