| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0010 |
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| Symbol | |
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| ID | 7171882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 13084 |
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| End bp | 14547 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643538502 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_002434440 |
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| Protein GI | 218885119 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.0508854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGGC GCATGCGGTC TTTGCTCGGC CTTGCGGATG ACGGCGACCA CTCTGCCCGC
ACCCCTTCCG CCACCAGCGG TCAGGAGGCG GGAAAGGCGG CCCCGTCTTC CGGCGCGCGC
ATCGTCCCGC CGACCGTTCA GGACGGCACG GCCTGCGCCC CGGTGTTGCT GGTGGCCCGG
CAGCCGGTGT TCGACGCCTC GGGAGAGGTG TGGGGTTACG AGCTGCTGTT TCGCCATCCC
GATTCCCCCG AATGTTGCAG CGGCGATGTG GACGCCAGCG TGGCCACCGC GTCGGTCATT
GCCGACGGCT TCGCCATGGC CCGTCCGGTC CTTGGGCAGG GGCAGCGGCT GCTGGTGAAC
TTCGCGGAGG ACATGCTGCT GGAGGGCACG CCGCGCATCC TGCCCCCCGA CGTGTGCGGG
GTGGAGGTGC TGGAAACGGT GCCCGTCACC GAGGCCGTGT TGCTGGCGCT TTCCGCCCTC
AAGTCCGAGG GCTACCTGAT CGTGGTGGAC GACTACGCGG GGCAGCCCGG TATGGAAGCG
CTGCTGGACC TGGCGGACAT CGTCAAGATC GACGTGCTGG GCCGCCCGCT GGCGGACCTG
GCCCGCGACG TGGCAGGTCT GCGGTCCCGC CAGTGCCAGT TGCTGGCGGA AAAGGTGGAA
GACCTCGCCA CGCACAGGCA GTGCGAGGCC CTGGGCTTTT CGCTGTTCCA GGGGTTCTTC
TTCAGCAGGC CGGAACTGGT GCACGGCAGG CGGCTGGACA GTTCGCAGGC GGCCAAGATG
CGTCTTTTGG CCACCCTGGC CCGCGAGGAC GTGAACATCA AGGCCGCCAC CGAGGTGGTG
CGGTCCGACG CGGCCCTTTC GTACAAGCTG CTGCGGTACA TCAATTCCGT GCATTTCGGG
CTGCCGGTCA AGGTCACGTC CATCCAGCAC GGCATCTCGC TGCTGGGCAC GCGCAACCTG
GTGCAGTGGC TGTGCGTCAC CGTGCTTTCC GAATTCGACA CCGGGCCCAT GGCACGCGAA
CTCATCGCTG TTTCCGCCCT GCGCGCCAAG TTTCTGGAAT TGTGCTCATC CCGCGTCACG
TTACGGGCCA GGCAAATGGA CACCGGACAC ATGGAAGCCG GACAGGTCGG TACCGGACAG
GTCGGTACGG GACAGGCCCG GCCCGCTCCG CAGTCGGGGG CGATGTTCAT GCTCGGGCTG
TTCTCGCTGC TGGAACCCCT GCTGTGTCTG CCGCTGGCGG AACTGCTGCG TTCCCTGCCG
TTGGCGGATG AGCTGACCGA GGCCCTTGCC GCGCACACCG GCCCCTACGC GCCGTGGCTG
GAACTGCTGG AGCACTACGA ACGGGGCCGC TGGGACGAAG TGCTGGCCAG CGGCGAAGCC
ATGGGGCTTA CTCAGGCGGA CCTGGCCATG GCCTACGCGG GCGCGCTGGA ATGGAGCGCC
TTCTTTCACG ACAGGCGGGA GTAA
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| Protein sequence | MLRRMRSLLG LADDGDHSAR TPSATSGQEA GKAAPSSGAR IVPPTVQDGT ACAPVLLVAR
QPVFDASGEV WGYELLFRHP DSPECCSGDV DASVATASVI ADGFAMARPV LGQGQRLLVN
FAEDMLLEGT PRILPPDVCG VEVLETVPVT EAVLLALSAL KSEGYLIVVD DYAGQPGMEA
LLDLADIVKI DVLGRPLADL ARDVAGLRSR QCQLLAEKVE DLATHRQCEA LGFSLFQGFF
FSRPELVHGR RLDSSQAAKM RLLATLARED VNIKAATEVV RSDAALSYKL LRYINSVHFG
LPVKVTSIQH GISLLGTRNL VQWLCVTVLS EFDTGPMARE LIAVSALRAK FLELCSSRVT
LRARQMDTGH MEAGQVGTGQ VGTGQARPAP QSGAMFMLGL FSLLEPLLCL PLAELLRSLP
LADELTEALA AHTGPYAPWL ELLEHYERGR WDEVLASGEA MGLTQADLAM AYAGALEWSA
FFHDRRE
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