Gene DvMF_0009 details

Gene Information

• Locus tag: DvMF_0009
• ID: 7171881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 10937
• End bp: 12919
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 643538501
• Product: protein of unknown function DUF814
• Protein accession: YP_002434439
• Protein GI: 218885118
• COG category: [K] Transcription
• COG ID: [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 64
• Fosmid unclonability p-value: 0.111959
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACGCCC ATCTGTTCCG CCGCGTCTGC GGGGCGCTGG TTCCGTTGCT GGCCGGGTGC 
CGCATCGAAA AGATCCACGC ACCCGCGCCG GACATCCATT CGCTCACCAT CTTCGCCGCC 
GGGCGCAAGC AGGTGCTGGT GCTGCGCCAC GGGCGTCGGG CGCCGCTGTT GTATCTGGCC 
GCGCACAAGC CGCCCAATCC TGCCCGGCCC GACGCCCAGA TCATGTTGCT GCGCAAGCAT 
CTGGCCGGAC GCCGCGTGGC CTGGGCCGGG TGCGACTGGC CCCGCCGCAG GCTGGCCCTA 
CGCATGACGC CGCCAGCCGG ACAGCCAGAC GTGACGGCAG ACGTGACGGC AGACGTGACG 
GCAGACGGGC GGCCAAGCGG TAAGGCAGTC GGGCAGGGCG CCCTGGTACT GCTGGACCTG 
CGCGAGGGCA TGCGCCTCGT GGATGCCCTT CCCCCCGACT TCGGCGCGGA CCCGGTCTGG 
CCGCAGTTGC CGCCCCCGTC GCAGCCCGGC GCCTTGAAGG CCGCCCTGCG TTCGCTGTGC 
GACGATGCCG CCACCGGGGC CGACCCGGTG CTCACTCCGG CCCTGCGGCG CACCCTGACA 
GCCCTCGTGG GTGATGGGCA GCACGCCAGT CCTTCCGCCA GTCCCTCCGG CTGCGTCCCC 
GATAGTTTTC CCGACGCCCT GTCCGCTACC TTCCTTGACG CCCCGGAAGA CGGCGTGCTC 
GACGCCTGCG CCCTGCTGGT GGACCTGGAT TCCGGCGAGG GCGACGTGTT CCTGTACCGC 
CAGCGCAACG AATCGGGGGA TGGGCCCGGC GAGACCGGCG GTCCCGGCGA ACCCGACGAG 
CTTTCCGCAT GGCCCCTGCC CGCATCCCTG CGCGGCAACC GGACGGAAGA GGTGCACGAA 
TCCGCGCTGG ATGCCGCCGC CATTCTGGGC GAGGCCGCCG CGTTCACCGG GCTTGCCGAT 
GCCGCGCGCA CGGATGCCGC CTCCCCGTTC AAGGCCGAAG CCAGGCGGCT GCGCCGCCTG 
CTGGCAAAGC TGGACGACGA GGAGCGCCGC CTGCGCGCCC TGCTGGGCCA GCGGGCCGAT 
GGCGTGGCCC TGCAAGCGGT GCTCTACCAG TACCCGCCGG ATGCCCGCCT GCCGGAAGTG 
GTGGTGCCCG ATGAGGCCTT GCCCGTGACG GCATGGCCGG AAGGAGCGGG CGACGAGCCA 
TCGTCCCCGG CGGGCACCCT CGGCGCAGGC CCCGCAGGCC GCACCATCCG TCTCGACCCG 
CTGCTGACCG TGCGCGAGAA CATGGCCGCC ATGTTCCACC GGTCCGACCG GGGCGCGCGC 
GGACTCGCCA TTCTCGAACG CCGCCGGGCG GAAGTGGCCC GCGACCTTGC CGCCGCCGAG 
CAGGGCGCAG CCATGCCCCC CGGCAGCGGA TTGCCCCCGG TACAGGCCCG GTTCACTCCC 
GCCTCCCCGG TCAGGCAGGG CAAGGGCGGC AAGGCCACCT CGGATTCGCG CAGGCAGCCC 
CGCGACGCCG GAACCGGCAG CGACGTGCAG CGCTTTCGCA GTTCCGACGG CTTCCTGCTG 
CTGCGGGGGC GGTGTGCCGA GGGCAACGCG GAACTGCTGC GCATCGCCTC GCCCTTCGAC 
TGGTGGCTGC ACGCGGAGGA CGGCCCCAGC GCGCACCTGA TCATCCGGCG CGACCACCCG 
GCGCATCAGG TGCCGGAACG CACCCTGGCC GAGGCCGCCG CGCTGGTGGC GGTGAAAAGC 
TGGCAGCGCA ACGCCGCCCG CGCCCGGATC ATGGTGGCCC TGGTGCGCGA CGTGCGCGCC 
GTGAAGGGTG CCGCCCCCGG CGCCGTGCGG GTGGATGCGG TGTCCCGATC CCTTTCCGTG 
GCGCCCGACG CCACGCTGGA GGCCGCCCTG CGCCTGGACA ATGATCCGGA CGCCACCGTC 
CCGCTACCCG TCGCAAAGCC AGCCCACGCC ACCACCGGCA AGGGGCGCGG AGGACGGCGC 
TGA 

 

Protein sequence

MDAHLFRRVC GALVPLLAGC RIEKIHAPAP DIHSLTIFAA GRKQVLVLRH GRRAPLLYLA 
AHKPPNPARP DAQIMLLRKH LAGRRVAWAG CDWPRRRLAL RMTPPAGQPD VTADVTADVT 
ADGRPSGKAV GQGALVLLDL REGMRLVDAL PPDFGADPVW PQLPPPSQPG ALKAALRSLC 
DDAATGADPV LTPALRRTLT ALVGDGQHAS PSASPSGCVP DSFPDALSAT FLDAPEDGVL 
DACALLVDLD SGEGDVFLYR QRNESGDGPG ETGGPGEPDE LSAWPLPASL RGNRTEEVHE 
SALDAAAILG EAAAFTGLAD AARTDAASPF KAEARRLRRL LAKLDDEERR LRALLGQRAD 
GVALQAVLYQ YPPDARLPEV VVPDEALPVT AWPEGAGDEP SSPAGTLGAG PAGRTIRLDP 
LLTVRENMAA MFHRSDRGAR GLAILERRRA EVARDLAAAE QGAAMPPGSG LPPVQARFTP 
ASPVRQGKGG KATSDSRRQP RDAGTGSDVQ RFRSSDGFLL LRGRCAEGNA ELLRIASPFD 
WWLHAEDGPS AHLIIRRDHP AHQVPERTLA EAAALVAVKS WQRNAARARI MVALVRDVRA 
VKGAAPGAVR VDAVSRSLSV APDATLEAAL RLDNDPDATV PLPVAKPAHA TTGKGRGGRR