Gene DvMF_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0002 
Symbol 
ID7171869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1771 
End bp2325 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content64% 
IMG OID643538489 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002434432 
Protein GI218885111 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.138514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC CGCCCTACAA GGAAATAGCG CCGCGCCTGG CCGGGCTGCG TGACGCCTGC 
GGCTTTTCGC GGCAGGAACT GGCGGACAAG GTGGGCGCAA CCGAGGCAGA GGTGGCCCGC 
TTCGAAAGCG GCGAGGTGGA GATACCGGTG AGCTTTCTCA CCGACGTGGC CCGCGAATGC 
GGCGTGGACC TGACCGCGCT GATTTCCGGC GGCGACGCCC ACCTGCACGG CTACAGCCTG 
GTGCGCAAGG GCGAGGGCCT TTCGGTGCAG CGCCGCAAGG ACTACGACTA CTGGAACCTG 
GCCTCGCGCT TCACCAACCG GCGCATGGAG CCGTTTCTGG TGCGCGTGCC CCCCAAGGAT 
GAAAAGGATC TGGTGTTCAA CTACCACCGG GGCCAGGAAT TCATCTACAT CCTGGAAGGC 
CGCCTGGAGA TATGGCTGAA TGACGCGCGC CACGTGCTGG CCGTGGGTGA CAGCCTGTAC 
TTCAGTTCGC GCATCCCGCA TGCCCTGCGC GGCCTTGATG GTGCGGATGC GGTCTTTCTG 
GACGTAATTA GCTAG
 
Protein sequence
MQQPPYKEIA PRLAGLRDAC GFSRQELADK VGATEAEVAR FESGEVEIPV SFLTDVAREC 
GVDLTALISG GDAHLHGYSL VRKGEGLSVQ RRKDYDYWNL ASRFTNRRME PFLVRVPPKD 
EKDLVFNYHR GQEFIYILEG RLEIWLNDAR HVLAVGDSLY FSSRIPHALR GLDGADAVFL 
DVIS