| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1675 |
|---|
| Symbol | |
|---|
| ID | 7082194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 1689520 |
|---|
| End bp | 1691019 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643458784 |
|---|
| Product | alpha amylase catalytic region |
|---|
| Protein accession | YP_002353561 |
|---|
| Protein GI | 217968055 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAA AGTTCTTCAT TAAGAAAGCT TTTGTCCTCA TATTTATACT CTTAATTTTT
ATAACCTATA TTCATGGATA TAATGAACCC TGGTATAAAG ATTCCATCTT CTATGAGGTA
TTTGTAAGAT CCTTTGCAGA CAGTGACGAA GACAAGGTAG GAGATATAAA TGGACTTATA
GAGAAATTAG ACTACTTTAA AAATCTAAAT ATTAATGCTT TATGGTTGAT GCCCATCTTT
CCCTCAATAA GCTATCATGG CTATGACGTT ACTGATTATT ATGATATTCA TCCCGCTTAT
GGTACCTTAG AAGATTTTGA AAATTTGGTA AAAAAAGCCC ATGAAAAAAA TATTAAAATT
ATTCTTGATT TAGTAATAAA CCATACTTCT TCTAGACATC CTTGGTTTGT CTCTGCTACA
TCTTCTTACA CTTCCCCTTA TAGGGACTAT TATATATGGA GTCCAAAAAA GCCTGATAAA
AATCCTAATT TATGGTATCA AAAACCCACA GGATACTACT ATGCATTATT TTGGTCAGAA
ATGCCTGATC TAAATTTTGA CAATCCCAAA GTAAGAGAAG AGGTTAAGAA GATTGCAAAA
TTCTGGATAG AAAAGGGTGT TGATGGATTT AGACTTGATG CAGTCAAACA TATCTACGAT
GATGACTATA AAAACATCCA ATGGTGGAAG GAGTTCTACT CATATCTAAA AGGTATAAAA
CCTGATATTT ATCTTGTAGG TGAGGTTTGG GATAATGAGT ATAAGATAGC AGAATATTAC
AAAGGTTTAC CATCAAACTT TAATTTTCCC CTCGCTGATA AAATAATAAA TTCTGTAGCA
AACCAAAGAG ACTTAGGACT TATAGAATTC CTACAATTTG AAAGAGAACT TTTTAAAGAA
AGCAATCCTA ACTTTATTGA TGCCATCTTT TTGAGAAACC ATGATCAAGT AAGAGTTAGA
ACATCTTTCG GAGGAAGCAT AGATAAGAGT ATTCTTGCTG GATCTATTTA TTTGACTTTA
CCAGGAACTC CTTTTATATA TTATGGAGAA GAAATAGGAA TGGAGGGAGC AAAACCTGAT
GAGTATATAA GGGAGCCCTT CAAATGGACC GATGATATGA AATCCAAGTA TCAGACCTAT
TGGATCATCC CAAGATATAA TTTTATAGGA AACGGTATAG CCTTTGATAC GGAAGAAAAA
GATCCTAATA GTATATATAA TCACTACAAA AGAATTTTAG AGTTAAGAAG TAAATATAAA
GCTTTATCTC TGGGAAGTAT TGAGAGGATA GAAACTCAAG ACAAATCTAT CCTTGCCTAT
AAGCGAGAAC TAAACAACGA AGGATTAATA GTTATTCACA ATCTAAATAG AGTAGAAACC
ACCTTTAACC TTAGTTTTAG CGTAAAAAAT GAGGATATTC TCTATATTAG AAATGCTAAA
CTTAATAATA ACAAAGTGAT TTTAGGTTCT TATAGCACTG TTATAATCAA AATTCCATAA
|
|---|
| Protein sequence | MRKKFFIKKA FVLIFILLIF ITYIHGYNEP WYKDSIFYEV FVRSFADSDE DKVGDINGLI
EKLDYFKNLN INALWLMPIF PSISYHGYDV TDYYDIHPAY GTLEDFENLV KKAHEKNIKI
ILDLVINHTS SRHPWFVSAT SSYTSPYRDY YIWSPKKPDK NPNLWYQKPT GYYYALFWSE
MPDLNFDNPK VREEVKKIAK FWIEKGVDGF RLDAVKHIYD DDYKNIQWWK EFYSYLKGIK
PDIYLVGEVW DNEYKIAEYY KGLPSNFNFP LADKIINSVA NQRDLGLIEF LQFERELFKE
SNPNFIDAIF LRNHDQVRVR TSFGGSIDKS ILAGSIYLTL PGTPFIYYGE EIGMEGAKPD
EYIREPFKWT DDMKSKYQTY WIIPRYNFIG NGIAFDTEEK DPNSIYNHYK RILELRSKYK
ALSLGSIERI ETQDKSILAY KRELNNEGLI VIHNLNRVET TFNLSFSVKN EDILYIRNAK
LNNNKVILGS YSTVIIKIP
|
|---|
| |