| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1534 |
|---|
| Symbol | trmD |
|---|
| ID | 7081969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 1545690 |
|---|
| End bp | 1546427 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643458643 |
|---|
| Product | tRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_002353422 |
|---|
| Protein GI | 217967916 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00555371 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGGA TAGACATAGT AACAATTTTC CCTGAAATGT TTAAAGGTCC TTTTGATGTA
AGTATTTTAA AGAAGGCTCA AGATAAAGGT TTGGTAGAAA TTAAGGTATA TAATCTGAGA
GATTTTACAG AAGATAAACA TAGGACCGTT GATGATTATC CCTATGGCGG GGGTTCGGGG
ATGGTGATGA AGCCCGAGCC AATATTTAAG GCTGTGAGAA GTTTGAAAAA AGAGGATAGT
GAGGTAATTT TACTTTCACC AAGTGGAGAT TTATTTAATC AGAAAATTGC GGAAGAATTA
TCTAAGAAAA ATCATCTAAT ACTGATATGT GGTAGATATG AAGGAGTAGA CGAGAGGGTG
AAGAGTATAA TAACGAGGGA AATCTCTATA GGTGACTATG TTTTAACTGG AGGAGAAATA
CCTGCAATGG TAATAGTAGA TGCCGTGGTT AGGCTTGTGC CCGGGGTTTT GGGAGATCCT
GATTCCTTGA GGGAGGAATC CTTTCAGTGG GGTATATTGG AATATCCTCA GTATACCCAT
CCAAGAGATT TTGAGGGTAT GAAGGTTCCT GATATTTTAC TTTCTGGAAA TCATGAAAGA
ATTAGAAGAT GGAGGAGAAA GGAAGCTTTA AAGAAAACTT TCTTAAAAAG ACCTGATCTT
CTTGAGAAAA CTAGCTTGAC CCAAGAAGAT CTTGAACTTT TAGAAGAAAT AAAAAAAGAG
CTAAGAGAGG AGGTATAG
|
|---|
| Protein sequence | MLRIDIVTIF PEMFKGPFDV SILKKAQDKG LVEIKVYNLR DFTEDKHRTV DDYPYGGGSG
MVMKPEPIFK AVRSLKKEDS EVILLSPSGD LFNQKIAEEL SKKNHLILIC GRYEGVDERV
KSIITREISI GDYVLTGGEI PAMVIVDAVV RLVPGVLGDP DSLREESFQW GILEYPQYTH
PRDFEGMKVP DILLSGNHER IRRWRRKEAL KKTFLKRPDL LEKTSLTQED LELLEEIKKE
LREEV
|
|---|
| |