Gene Dtur_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1427 
Symbol 
ID7081779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1441860 
End bp1444343 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content33% 
IMG OID643458536 
ProductNucleotidyl transferase 
Protein accessionYP_002353315 
Protein GI217967809 
COG category[G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCCG TAATAATGGC TGGGGGTGAA GGTACCAGAT TAAGACCGCT TACTATAACT 
CGACCAAAAC CTATGACCTA TGTGGTAGGT AAGCCCATAA TGGAGCACAT AATTAATCTT
CTTTCGGAAC AAGGATTTAG GGAGCTAACA GCTACTTTAT ATTATCTTCC TGAGATAATT
CAAGAGTATT TTGCTGACGG TTCAAATTGG AATGTAAATC TGGATTATTC TATAGAAGAA
TCTCCTCTTG GAACAGCAGG TAGTGTGAAG TACGCTTTAA AAAATAAACC CAAGGAAAGA
ATATTAATAA TAAGTGGAGA TGCTCTTACC GATTTTAATC TCAATGAAGC AATAAAATTT
CACGAAGAAA AAGAAGCACT AGTTACAGTT GTACTTACAA GTGTAGAGAA CCCTTTAGAG
TATGGAGTAG TGATAATTAA CGAAGATGGA AGAATAATAA AATTTCTTGA AAAACCAAGT
TGGGGAGAGG TGTTTAGTGA TAATGTAAAT ACAGGAATCT ATATTCTTGA GCCAGAAGTG
TTAGATTATA TTCCTGAAAA TCAACCTTTT GATTTCAGTA AAGACTTATT TCCAATGTTG
CTTGAGAAGG GTGCTCCTAT ATATGGGTAT TTAGCACAAG GATATTGGTG CGATATAGGT
AATTTAGAAC AATTTTTACA AGCAAATTTT GATGTTCTAA ACAAGAAAGT AAAAATTAAA
ATTCCAGGAA GGGAAATTTT ACCTGGTATT TACACAAACG AAGACGTAGA AATTGATCCT
TCAGCTTTCA TAAGACCCCC TGTATATATA GGACAATTCA CAAAAATTAA CAATAATGTA
ACTGTATTAG GACCTACAAT AATTGGAGAT TCTGTTTATA TAGATAACGA AGCTAAGCTC
CAAAGGTGTG TAGTTTTTAA TAATACCTAT ATAGGCAAAA AGGTTACAAT TTTTTCCTCC
ATAATAGGAA GCAAATGCAA CATCAAAACT GCAACAAAAA TTGAGGAAGG TGTAACTATA
GGTGATAACA CAACTATTGG AGAAAGGGTA TTTATAAACA GTGGGGTCAA AATATGGCCC
AATAAAACCG TTGAAACAGG GACCATTGTC AACAACAGCA TAATTTGGGG AAGCCAATGG
AGAAAATCTT TATTTGGATA TAGAGGCATT TCAGGCAAAA TAAATATTGA TATAACTCCA
GAAATTGCTA CCAAGATTGG AGCAGCTTTC GGAACTATTC TTCCAAAGAA CTCTTTCGTA
GTAATGAGTA GAGATGAGAA GCCTGCTTGT AGAATGATTA AAAGAGCAAT ATTAACAGGT
ATACTTTCCA CAGGAGTAAA TGTTTTTGAT ATAAGAACTC TCCCTATACC TGTATCTAGA
TATTCCATAG AAAACCTTCA CGCCATCGCT GGGGTGCACA TAAGAATTTC TCCATATAAT
TCTGAAAAAA TACTAATAGA GTTCTTAGAT AAAAAGGGTA CAAATATAGA TAAAAATACT
GAAAGAAAAA TAGAGAACAT ATTTTTCCGT GAAGATTTTC GAAGAACTTA TACTGAGGAT
ATAGGAGTCA TTAGGTTTCC CCCTCATATA ATTGAATATT ATGTGGAAGG TCTACTTAAC
AGAGTAGACA TATCATTGAT TAGAAAAAAA GACTTCAAAA TTGTAATAGA TTACCAAGGT
AATAGTTCCT CTTTATTTTT GCCCAATGTA TTTTCACGAC TGGGAATAGA AAATATATCT
TTAAACCTAT ACGGAGAAGA GACTAAAAGA TTTTTAGTAC CTGAAGAAGA AGTATTAAAA
ATAACTCAAT CTATAGGAGC TGATTTTGGG ATTATCATAA ATAATGACAG TGAAGGTTTT
TCTCTAATAA CCAACGAGGG TAAGATTATA GCAAAGGATG ATTTAATTTC ATTAATAACT
TACTTGATTT TAAAAAGAGA TCCCAAGTCA CAAATTGTAA TACCAGTAAC CGTATCAAAA
GCGGTAGAAA AAGTAGCCGA AATCTTAGGA GGAAGCATAA TACGAAGTAA AACATCCCCA
TCAGAACTTA CAAAAACCAT ATTAAGATCT GAGGCAAGAT TTGGTGCAAG TGAAGATGGA
TTTATCTTCC CTGAATTTCA ACTATCGTTT GATGGAATTT TTGCCTTAAT AAAATTCCTC
GAACTATTTT CTATGGTTAA CATAACTATA ACGGAAATAG TTAACACTGT TCCTAAGTAC
TATAAAGTCA GTGGTACTGT AGATTGCTTC TGGGAAAATA AAGGCAAAAT AATGAGAAAA
CTTATAGAAA AATTTGCTGA AAAACAAATT GATTATATTG ATGGAATAAA AATTTATTTT
GACCATTCTT GGGTCTTAAT TTTGCCCCAT CCTGAAGACT CTTCCTTTAT AGTTTATGCC
GAATCTTCTA CCCTTAAAGA GGCACAAGAT TTGTTAGAAG AATTTACGAA TATTATTAAA
GAACTTAATT CCATTTTAAA CTAA
 
Protein sequence
MRAVIMAGGE GTRLRPLTIT RPKPMTYVVG KPIMEHIINL LSEQGFRELT ATLYYLPEII 
QEYFADGSNW NVNLDYSIEE SPLGTAGSVK YALKNKPKER ILIISGDALT DFNLNEAIKF
HEEKEALVTV VLTSVENPLE YGVVIINEDG RIIKFLEKPS WGEVFSDNVN TGIYILEPEV
LDYIPENQPF DFSKDLFPML LEKGAPIYGY LAQGYWCDIG NLEQFLQANF DVLNKKVKIK
IPGREILPGI YTNEDVEIDP SAFIRPPVYI GQFTKINNNV TVLGPTIIGD SVYIDNEAKL
QRCVVFNNTY IGKKVTIFSS IIGSKCNIKT ATKIEEGVTI GDNTTIGERV FINSGVKIWP
NKTVETGTIV NNSIIWGSQW RKSLFGYRGI SGKINIDITP EIATKIGAAF GTILPKNSFV
VMSRDEKPAC RMIKRAILTG ILSTGVNVFD IRTLPIPVSR YSIENLHAIA GVHIRISPYN
SEKILIEFLD KKGTNIDKNT ERKIENIFFR EDFRRTYTED IGVIRFPPHI IEYYVEGLLN
RVDISLIRKK DFKIVIDYQG NSSSLFLPNV FSRLGIENIS LNLYGEETKR FLVPEEEVLK
ITQSIGADFG IIINNDSEGF SLITNEGKII AKDDLISLIT YLILKRDPKS QIVIPVTVSK
AVEKVAEILG GSIIRSKTSP SELTKTILRS EARFGASEDG FIFPEFQLSF DGIFALIKFL
ELFSMVNITI TEIVNTVPKY YKVSGTVDCF WENKGKIMRK LIEKFAEKQI DYIDGIKIYF
DHSWVLILPH PEDSSFIVYA ESSTLKEAQD LLEEFTNIIK ELNSILN