Gene Dtur_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1176 
Symbol 
ID7082652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1194980 
End bp1196368 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content30% 
IMG OID643458269 
ProductFimbrial assembly family protein 
Protein accessionYP_002353069 
Protein GI217967563 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGAA TTCAATGGCT TAATGGAAAA TTAAGGATTG CGAGGATTTC TAAAAAAGGA 
AAAAAAGTAG AGCTGAGAGA TTATATTGAA GTAGAAATTC CTACGGGAGA TTTTTGGAAT
AGAGGATTAG AAGAAGTAAA TTTAGTTAAA GAGAGAATTG AGAAGGTCTT TAGGGAAAAC
AAAATAAAAG ACAAAGAAAT TGTTATGCTT TTTGAAAGCA AAGATATATC TCTAAGGACC
TCAGAATACC CTTATATGTC TATAAAAGAG CTTGAAATGG CAATTCTTGA TGATCTTGAA
GAGTATCAAG CCTTTGATGA AAATTATAGT CTGTTTACCT TTTCCATGCT TGATCAGGAT
AAAAGTAAGA TAAGAACTAC TGTAGCCACA ATTCCTAAGG TAATAGTTAA TACTTGGGAG
AGCATCTTTA AGAATTTAGG ATGTAAGCTT GTTTCTTTTG AGCCATCTTT TGTCTCAGGG
ACAAGGTATA TTCTTTGGTC GGGTAAAAAT AAGTATCCCA ATGGAATTAT ATTTATAGGT
AATGAGACCA CAGATTTAGT TTTTATAAAG GAAAAAAAGA TTAATTCTAT TATAAACTTA
AGTGTGGGAA TTAATGATTT CTATAACTTA GATGAACTAT CCTTTGATAC TACCTTTTTA
AGCTGGCAAG AAGAGTTGAT TACTTATTTA AACAGTGCTT TTTATGAACT TGGAGATAAA
AATATAGTAA TATTTGGAGA AGATGAAAGA TATTTTAAGG TTGCAGAGAA TTTTGTAAAA
AATCTATCCT TAGATTACAA AGTAGATATC ATAGAAAATC TCAATATTTC CCTTTTGGGA
ACAGCATTGT ATGACGTAAA TATACTAAGG ATCAATTTTA TAAAAGAGAG GATTCTTATA
GATAGAGAAT TAATCATAAG ATCCCTTATT TCCTTTCTTC TTGCTCTTTC TTTAATCTTT
CCTATAAATT TCTATTTTGA TTTAAAAATT AGAGATTTGG ATAGGAAAAT AAACTATCTA
CAAAGCGAAA TTCTCAAATA CAATGATCAA ATTTCTAATT TGAGGAAAGA AGTTGACAAT
CAAAATGCAA TGGTACAAAT ACTAGAAAAA TGGCTTGAAG AAAGATCTGC AGTATCTCTT
CCTTTTATCT TTCTTTCCGA CTTAAGATAT TTTATCCCTA AAAATGTATG GCTTACAGCT
CTTGATATTG GAATTGATAA AAAATTAATT ATAGAGGGAT ACAGTCTTGA TACCGAAGGA
GTTGCGGATT TTTTGCTTGC ATTGTCTCGT TATGAGAGGA TTAAAAGTAT TAAATTAGAA
AGCGCTATTT TAGAAATTAT GGAAAACAAG GAAGTACAAA AATTTAGGGT GGTGGGGTAT
ATAAAATGA
 
Protein sequence
MIGIQWLNGK LRIARISKKG KKVELRDYIE VEIPTGDFWN RGLEEVNLVK ERIEKVFREN 
KIKDKEIVML FESKDISLRT SEYPYMSIKE LEMAILDDLE EYQAFDENYS LFTFSMLDQD
KSKIRTTVAT IPKVIVNTWE SIFKNLGCKL VSFEPSFVSG TRYILWSGKN KYPNGIIFIG
NETTDLVFIK EKKINSIINL SVGINDFYNL DELSFDTTFL SWQEELITYL NSAFYELGDK
NIVIFGEDER YFKVAENFVK NLSLDYKVDI IENLNISLLG TALYDVNILR INFIKERILI
DRELIIRSLI SFLLALSLIF PINFYFDLKI RDLDRKINYL QSEILKYNDQ ISNLRKEVDN
QNAMVQILEK WLEERSAVSL PFIFLSDLRY FIPKNVWLTA LDIGIDKKLI IEGYSLDTEG
VADFLLALSR YERIKSIKLE SAILEIMENK EVQKFRVVGY IK