Gene Dtur_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1045 
Symbol 
ID7081854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1062630 
End bp1063445 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content32% 
IMG OID643458126 
Producthemolysin A 
Protein accessionYP_002352939 
Protein GI217967433 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.323407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGAAA AGGAAAGATT AGATGTATTA TTAGTAAAAA GGGGCTTTTT TGAGAGTAGG 
GAAAAGGCGA GAGCTGCTGT TATAGCTGGC ATAGTGAAAG TAAATGGTAA CGTTGTAATT
AAACCTGATT TAAAAATTCC TATCGACTCT CTGATTGAAA TAAAAGAGAA TATACCCTAT
GTTAGTAAGG GCGGTTTTAA ATTAAAGAAA GCAATTGATA CTTTTGAAGT TGATGTCAAA
GGAAAGATTG CAGTAGATAT AGGAGCAAGC ACGGGGGGAT TTACGGATTG TCTTCTTCAA
GAGGGAGCTT TAAGGGTATA TGCTGTCGAT GTAGGAAAAG GACAACTTCA TGAGAAATTG
AGAAGAGATT CAAGAGTAAT ATTGAAAGAA GGGATAAATG CGAGGTATTT GAAAGAAGGC
GATATTCCAG AAAAGGTGGA TATTGTGACT ATTGATGTTT CTTTCATATC TGTTTTAAAG
ATATTTCCAT CTATAAAAAG TTTTTTGCAT GGTGAAAGTA TAATTATACC CCTAATAAAA
CCTCAATTTG AAGCCTCTCC TAAGGAAGTA AGCAGAGGAG GAATAGTAAA AAATATTGAC
GTACATATAA AAATATTAGA GAATATTAAA GAAACTTTAA AAGAGCAAGG TTTTTACATG
CAAAAATTAA CTTATTATTT GAGCAAAGAA GGTAAAGGAA ATATTGAGTA TCCCTCATTA
TTTACTTTAA AACCAGAGCG AGAAATAGAA GAAGTTGAGA TAGAAAAAGT AGTTCAGGAG
GCATTTTCAA ATTGGAAATT AAGCTCCAAA AAATAG
 
Protein sequence
MKEKERLDVL LVKRGFFESR EKARAAVIAG IVKVNGNVVI KPDLKIPIDS LIEIKENIPY 
VSKGGFKLKK AIDTFEVDVK GKIAVDIGAS TGGFTDCLLQ EGALRVYAVD VGKGQLHEKL
RRDSRVILKE GINARYLKEG DIPEKVDIVT IDVSFISVLK IFPSIKSFLH GESIIIPLIK
PQFEASPKEV SRGGIVKNID VHIKILENIK ETLKEQGFYM QKLTYYLSKE GKGNIEYPSL
FTLKPEREIE EVEIEKVVQE AFSNWKLSSK K