| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1044 |
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| Symbol | |
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| ID | 7081853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dictyoglomus turgidum DSM 6724 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011661 |
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| Strand | + |
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| Start bp | 1060770 |
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| End bp | 1062626 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643458125 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_002352938 |
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| Protein GI | 217967432 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.213907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACTTC AGAAAATTGA GTCTCCAAAG GATCTTAAAA AACTCTCTAT AGAGGAATTA
AAAAAGCTTT CCTCTGAAAT AAGAGAAATT ATTATAAATA CTGTAGAAAA TAATGGTGGA
CATTTAGCAT CCAATTTGGG TACAGTAGAA CTAACCTTAG CACTTCATTA TGTCTTTGAT
GCTCCTAAGG ATAAAATTAT ATGGGATGTA GGACATCAAG CCTATACTCA TAAATTAATA
ACAGGAAGAG CAAAAGATTT TCATACTCTA CGTCAATATG GAGGAATTAG TGGATACATT
GCTCCTTGGG AAAGTGAATA TGACCATTTT GCTGTGGGGC ATGCGGGCAC ATCTCTTTCT
GCTGCTTTGG GTTTTGCAAA GGCAAGAGAT TTAAAGGGAG AAAAATATAA AGTTGTGGCT
GTAATAGGAG ATGGAGCATT GACATCAGGT ATGGCATTAG AGGCGTTGAA CCAAATTGGT
TATTTAAATA CTGATCTTAT TGTGATTTTA AATGATAATG AGCATTCTAT ATCTCCTAAT
GTGGGGGCTA TGGCTTTATA TTTAGCAAAG CTTCGTAAAC ATCCCCTATA TAGATTTTTT
AAACAGACGA CTCAAAACTT ATTAAAAAAT TCATCCATAG GAAAAGGTTT ATTGGCTTTT
GATTTAAAGT TAGAGAGGAG CTTAAAAAGT TTGCTTCTTG AGAATCCTAT GTTTGAATAT
TTAGGATTTA AATATTTTGG TCCCTTTGAT GGACATGATA TTCCTTTACT CATCTCAGTT
TTTAAGGGAA TAAAGGATAA TTTGTCTTGT CCTGTGTTGA TCCATGTTAC CACTAAGAAG
GGTATTGGAC ATAAAGATGC AGAGGCAACT CCATCTAAAT TTCATAGTAT AGGCTCGAAA
TCTGAAAAAG AGAAAAAGGT ACCAACTTAT ACGGAAGTGT TTGGTAAAGC TTTAGTAGAG
CTTGGAGGAA TGTATCCTGA GGTTGTGGCA ATAACAGCTG CTATGCCTGA AGGGACAGGA
CTCTCTTATT TTGCACAAAG GTTTCCTGAA AGGTTTTTTG ATGTAGGAAT TGCAGAACAA
CACGCAGTAA CTTTTGCAGC AGGTCTTGCA AAAAACGGCT TAAAACCTGT AGTTGCTATA
TATTCAACTT TCCTACAAAG ATCTTTTGAT CAAATAATAC ACGATGTATG TCTACAAAAG
TTACCTATAA CATTTGTTTT GGATAGGGCA GGTATAGTAA GCGATGATGG TCCCACTCAT
CAGGGGATTT TTGATCTCTC ATATTTGCGT TTAATTCCTA ATATGGTTAT CGCTGCTCCA
AAAGATGAAT CAGAACTTAG AGATCTCTTG TATACTGCAA TCAATTATCC CGGACCCTTT
GCTATAAGGT ATCCCAAAGG TAAAGGAGTA GGAGTTGAAT TAAAAAATAG ATTTGAAAAA
ATTGAAATTG GAAAAAGTGA AATAGTGAAA CAAGGAAGGG ATGTATTGAT TCTTGCTATT
GGTTCAATGG TTTATCCTGC TGTTGAAGCT GGGAATATTT TGAGATCAGA AGGTATTTAT
CCTACGGTAG TTAATGTTAG ATTTCTAAAG CCCTTAGACA TATTAACTTT AGAGGAGCTA
ATTTTATCTC ATAATACTAT AATAACTGTT GAAGAAAATG TGATTACAGG AGGACTTTTT
GGGGCTATAG CAGAACTAAT TAACATCTTA AAAATTAATA AAAAAGTTAT TCCTATTGGA
CTTCCTGATA AATTTATTGA GCAAGGAAAT GTACAACTCT TAAGAGACAT ATATGGCCTT
AATGAATACA AAATAGCTGA AAAAATCATA AGTGTTTTGG AAGATATTAA GGTGTAA
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| Protein sequence | MLLQKIESPK DLKKLSIEEL KKLSSEIREI IINTVENNGG HLASNLGTVE LTLALHYVFD
APKDKIIWDV GHQAYTHKLI TGRAKDFHTL RQYGGISGYI APWESEYDHF AVGHAGTSLS
AALGFAKARD LKGEKYKVVA VIGDGALTSG MALEALNQIG YLNTDLIVIL NDNEHSISPN
VGAMALYLAK LRKHPLYRFF KQTTQNLLKN SSIGKGLLAF DLKLERSLKS LLLENPMFEY
LGFKYFGPFD GHDIPLLISV FKGIKDNLSC PVLIHVTTKK GIGHKDAEAT PSKFHSIGSK
SEKEKKVPTY TEVFGKALVE LGGMYPEVVA ITAAMPEGTG LSYFAQRFPE RFFDVGIAEQ
HAVTFAAGLA KNGLKPVVAI YSTFLQRSFD QIIHDVCLQK LPITFVLDRA GIVSDDGPTH
QGIFDLSYLR LIPNMVIAAP KDESELRDLL YTAINYPGPF AIRYPKGKGV GVELKNRFEK
IEIGKSEIVK QGRDVLILAI GSMVYPAVEA GNILRSEGIY PTVVNVRFLK PLDILTLEEL
ILSHNTIITV EENVITGGLF GAIAELINIL KINKKVIPIG LPDKFIEQGN VQLLRDIYGL
NEYKIAEKII SVLEDIKV
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